Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CHL1O00533 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHL1O00533 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHL1O00533 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CHL1O00533 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC17.02■□□□□ 0.32
CHL1O00533 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHL1O00533 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHL1O00533 RBP4-203ENST00000371469 814 ntTSL 5 BASIC17.02■□□□□ 0.32
CHL1O00533 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHL1O00533 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHL1O00533 DMKN-203ENST00000402589 935 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
CHL1O00533 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC17.02■□□□□ 0.32
CHL1O00533 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHL1O00533 HNRNPA1P55-201ENST00000505935 955 ntBASIC17.02■□□□□ 0.32
CHL1O00533 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC17.02■□□□□ 0.32
CHL1O00533 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
CHL1O00533 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC17.02■□□□□ 0.32
CHL1O00533 GRAMD4P6-201ENST00000556999 244 ntBASIC17.02■□□□□ 0.32
CHL1O00533 AC022211.3-201ENST00000584339 400 ntTSL 3 BASIC17.02■□□□□ 0.32
CHL1O00533 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC17.02■□□□□ 0.32
CHL1O00533 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC17.02■□□□□ 0.32
CHL1O00533 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
CHL1O00533 ZCWPW1-208ENST00000490721 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHL1O00533 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC17.02■□□□□ 0.32
CHL1O00533 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHL1O00533 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHL1O00533 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHL1O00533 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC17.02■□□□□ 0.31
CHL1O00533 VPS26A-203ENST00000395098 2554 ntTSL 5 BASIC17.02■□□□□ 0.31
CHL1O00533 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC17.02■□□□□ 0.31
CHL1O00533 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHL1O00533 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHL1O00533 LINC00910-201ENST00000341011 2303 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHL1O00533 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHL1O00533 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
CHL1O00533 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHL1O00533 AC097376.2-205ENST00000610159 5334 ntBASIC17.01■□□□□ 0.31
CHL1O00533 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHL1O00533 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHL1O00533 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CHL1O00533 MAGEB1-201ENST00000378981 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHL1O00533 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHL1O00533 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHL1O00533 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHL1O00533 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC17.01■□□□□ 0.31
CHL1O00533 AP001331.1-201ENST00000413008 1015 ntBASIC17.01■□□□□ 0.31
CHL1O00533 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC17.01■□□□□ 0.31
CHL1O00533 AC105443.1-201ENST00000433754 712 ntBASIC17.01■□□□□ 0.31
CHL1O00533 VPS33A-202ENST00000451053 1154 ntTSL 3 BASIC17.01■□□□□ 0.31
CHL1O00533 MARK2P17-201ENST00000498560 841 ntBASIC17.01■□□□□ 0.31
CHL1O00533 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC17.01■□□□□ 0.31
CHL1O00533 EXTL3-AS1-204ENST00000523789 543 ntTSL 2 BASIC17.01■□□□□ 0.31
CHL1O00533 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHL1O00533 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC17.01■□□□□ 0.31
CHL1O00533 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC17.01■□□□□ 0.31
CHL1O00533 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CHL1O00533 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC17.01■□□□□ 0.31
CHL1O00533 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC17.01■□□□□ 0.31
CHL1O00533 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC17.01■□□□□ 0.31
CHL1O00533 AC009118.3-201ENST00000622896 873 ntBASIC17.01■□□□□ 0.31
CHL1O00533 AC010601.2-201ENST00000623060 774 ntBASIC17.01■□□□□ 0.31
CHL1O00533 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHL1O00533 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHL1O00533 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CHL1O00533 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHL1O00533 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHL1O00533 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHL1O00533 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHL1O00533 LINC01801-202ENST00000590963 2077 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHL1O00533 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHL1O00533 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC17.01■□□□□ 0.31
CHL1O00533 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC17.01■□□□□ 0.31
CHL1O00533 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CHL1O00533 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHL1O00533 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHL1O00533 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CHL1O00533 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC17.01■□□□□ 0.31
CHL1O00533 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHL1O00533 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHL1O00533 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC17.01■□□□□ 0.31
CHL1O00533 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CHL1O00533 LINC00567-201ENST00000569854 3409 ntBASIC17.01■□□□□ 0.31
CHL1O00533 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CHL1O00533 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHL1O00533 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHL1O00533 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHL1O00533 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHL1O00533 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHL1O00533 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHL1O00533 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHL1O00533 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHL1O00533 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC17■□□□□ 0.31
CHL1O00533 RORC-201ENST00000318247 2180 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CHL1O00533 PMF1-201ENST00000368273 884 ntTSL 2 BASIC17■□□□□ 0.31
CHL1O00533 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CHL1O00533 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC17■□□□□ 0.31
CHL1O00533 ZNF589-202ENST00000412564 593 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHL1O00533 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC17■□□□□ 0.31
CHL1O00533 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHL1O00533 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms