Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TRIM6Q9C030 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
TRIM6Q9C030 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM6Q9C030 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM6Q9C030 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM6Q9C030 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM6Q9C030 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM6Q9C030 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM6Q9C030 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM6Q9C030 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
TRIM6Q9C030 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRIM6Q9C030 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.92□□□□□ -0.02
TRIM6Q9C030 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM6Q9C030 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TRIM6Q9C030 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM6Q9C030 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM6Q9C030 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM6Q9C030 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM6Q9C030 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
TRIM6Q9C030 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRIM6Q9C030 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM6Q9C030 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM6Q9C030 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM6Q9C030 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM6Q9C030 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM6Q9C030 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM6Q9C030 PTPRVP-205ENST00000641549 5067 ntBASIC14.91□□□□□ -0.02
TRIM6Q9C030 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM6Q9C030 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM6Q9C030 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRIM6Q9C030 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM6Q9C030 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM6Q9C030 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
TRIM6Q9C030 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM6Q9C030 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM6Q9C030 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM6Q9C030 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM6Q9C030 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM6Q9C030 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
TRIM6Q9C030 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM6Q9C030 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM6Q9C030 U3.5-201ENST00000363448 216 ntBASIC14.91□□□□□ -0.02
TRIM6Q9C030 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM6Q9C030 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC14.91□□□□□ -0.02
TRIM6Q9C030 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC14.91□□□□□ -0.02
TRIM6Q9C030 KRT18P46-201ENST00000435568 1279 ntBASIC14.91□□□□□ -0.02
TRIM6Q9C030 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM6Q9C030 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM6Q9C030 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM6Q9C030 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM6Q9C030 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM6Q9C030 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM6Q9C030 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC14.91□□□□□ -0.02
TRIM6Q9C030 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM6Q9C030 TBC1D3P6-201ENST00000505954 962 ntBASIC14.91□□□□□ -0.02
TRIM6Q9C030 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM6Q9C030 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
TRIM6Q9C030 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM6Q9C030 AC055811.3-201ENST00000584952 686 ntBASIC14.91□□□□□ -0.02
TRIM6Q9C030 AC010632.2-201ENST00000588369 1224 ntBASIC14.91□□□□□ -0.02
TRIM6Q9C030 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM6Q9C030 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM6Q9C030 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC14.91□□□□□ -0.02
TRIM6Q9C030 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM6Q9C030 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM6Q9C030 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRIM6Q9C030 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRIM6Q9C030 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM6Q9C030 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM6Q9C030 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM6Q9C030 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRIM6Q9C030 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM6Q9C030 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM6Q9C030 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM6Q9C030 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
TRIM6Q9C030 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM6Q9C030 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM6Q9C030 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRIM6Q9C030 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM6Q9C030 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM6Q9C030 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM6Q9C030 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM6Q9C030 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TRIM6Q9C030 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM6Q9C030 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM6Q9C030 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRIM6Q9C030 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC14.9□□□□□ -0.02
TRIM6Q9C030 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
TRIM6Q9C030 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM6Q9C030 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TRIM6Q9C030 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRIM6Q9C030 AC114271.1-201ENST00000612689 2813 ntBASIC14.9□□□□□ -0.02
TRIM6Q9C030 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM6Q9C030 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM6Q9C030 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM6Q9C030 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
TRIM6Q9C030 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM6Q9C030 KRT8P42-201ENST00000405771 1399 ntBASIC14.9□□□□□ -0.02
TRIM6Q9C030 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM6Q9C030 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms