Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC11□□□□□ -0.65
RAB40CQ96S21 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RAB40CQ96S21 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC11□□□□□ -0.65
RAB40CQ96S21 AC106827.1-201ENST00000366454 431 ntBASIC11□□□□□ -0.65
RAB40CQ96S21 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC11□□□□□ -0.65
RAB40CQ96S21 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC11□□□□□ -0.65
RAB40CQ96S21 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC11□□□□□ -0.65
RAB40CQ96S21 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC11□□□□□ -0.65
RAB40CQ96S21 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC11□□□□□ -0.65
RAB40CQ96S21 AC026954.1-201ENST00000429771 1293 ntBASIC11□□□□□ -0.65
RAB40CQ96S21 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC11□□□□□ -0.65
RAB40CQ96S21 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC11□□□□□ -0.65
RAB40CQ96S21 AL118511.1-201ENST00000439341 794 ntTSL 1 (best) BASIC11□□□□□ -0.65
RAB40CQ96S21 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC11□□□□□ -0.65
RAB40CQ96S21 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC11□□□□□ -0.65
RAB40CQ96S21 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC11□□□□□ -0.65
RAB40CQ96S21 ACA64.2-201ENST00000459014 129 ntBASIC11□□□□□ -0.65
RAB40CQ96S21 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
RAB40CQ96S21 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC11□□□□□ -0.65
RAB40CQ96S21 FADS2-212ENST00000522639 360 ntTSL 5 BASIC11□□□□□ -0.65
RAB40CQ96S21 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC11□□□□□ -0.65
RAB40CQ96S21 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC11□□□□□ -0.65
RAB40CQ96S21 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC11□□□□□ -0.65
RAB40CQ96S21 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC11□□□□□ -0.65
RAB40CQ96S21 FADS2-215ENST00000574708 385 ntTSL 3 BASIC11□□□□□ -0.65
RAB40CQ96S21 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC11□□□□□ -0.65
RAB40CQ96S21 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC11□□□□□ -0.65
RAB40CQ96S21 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC11□□□□□ -0.65
RAB40CQ96S21 WNT11-204ENST00000621122 789 ntTSL 5 BASIC11□□□□□ -0.65
RAB40CQ96S21 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC11□□□□□ -0.65
RAB40CQ96S21 POLR1B-201ENST00000263331 4558 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
RAB40CQ96S21 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RAB40CQ96S21 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC11□□□□□ -0.65
RAB40CQ96S21 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RAB40CQ96S21 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC11□□□□□ -0.65
RAB40CQ96S21 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
RAB40CQ96S21 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
RAB40CQ96S21 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC11□□□□□ -0.65
RAB40CQ96S21 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC11□□□□□ -0.65
RAB40CQ96S21 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RAB40CQ96S21 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC11□□□□□ -0.65
RAB40CQ96S21 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RAB40CQ96S21 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC11□□□□□ -0.65
RAB40CQ96S21 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RAB40CQ96S21 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC11□□□□□ -0.65
RAB40CQ96S21 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RAB40CQ96S21 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC11□□□□□ -0.65
RAB40CQ96S21 HACD3-210ENST00000568793 1824 ntTSL 5 BASIC11□□□□□ -0.65
RAB40CQ96S21 BTG1-201ENST00000256015 4680 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RAB40CQ96S21 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC11□□□□□ -0.65
RAB40CQ96S21 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC11□□□□□ -0.65
RAB40CQ96S21 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC11□□□□□ -0.65
RAB40CQ96S21 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
RAB40CQ96S21 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RAB40CQ96S21 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
RAB40CQ96S21 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
RAB40CQ96S21 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RAB40CQ96S21 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RAB40CQ96S21 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RAB40CQ96S21 CAPN8-201ENST00000366872 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RAB40CQ96S21 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RAB40CQ96S21 KLF8-202ENST00000374928 4821 ntTSL 2 BASIC10.99□□□□□ -0.65
RAB40CQ96S21 PARP15-205ENST00000483793 4439 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
RAB40CQ96S21 RHBDL2-201ENST00000289248 2129 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
RAB40CQ96S21 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
RAB40CQ96S21 ITPRIP-202ENST00000337478 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RAB40CQ96S21 EFHC1-224ENST00000636702 2197 ntTSL 5 BASIC10.99□□□□□ -0.65
RAB40CQ96S21 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC10.99□□□□□ -0.65
RAB40CQ96S21 PLEKHM1-201ENST00000430334 5263 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RAB40CQ96S21 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RAB40CQ96S21 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
RAB40CQ96S21 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
RAB40CQ96S21 AC079776.1-201ENST00000401540 1152 ntBASIC10.99□□□□□ -0.65
RAB40CQ96S21 TISP43-201ENST00000409793 538 ntTSL 4 BASIC10.99□□□□□ -0.65
RAB40CQ96S21 MIR1909-201ENST00000411312 80 ntBASIC10.99□□□□□ -0.65
RAB40CQ96S21 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
RAB40CQ96S21 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC10.99□□□□□ -0.65
RAB40CQ96S21 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
RAB40CQ96S21 CD81-209ENST00000492627 886 ntTSL 3 BASIC10.99□□□□□ -0.65
RAB40CQ96S21 COQ10BP2-201ENST00000513804 724 ntBASIC10.99□□□□□ -0.65
RAB40CQ96S21 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC10.99□□□□□ -0.65
RAB40CQ96S21 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC10.99□□□□□ -0.65
RAB40CQ96S21 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC10.99□□□□□ -0.65
RAB40CQ96S21 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC10.99□□□□□ -0.65
RAB40CQ96S21 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC10.99□□□□□ -0.65
RAB40CQ96S21 MIR3615-201ENST00000581999 87 ntBASIC10.99□□□□□ -0.65
RAB40CQ96S21 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
RAB40CQ96S21 MIR6775-201ENST00000617557 69 ntBASIC10.99□□□□□ -0.65
RAB40CQ96S21 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC10.99□□□□□ -0.65
RAB40CQ96S21 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
RAB40CQ96S21 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
RAB40CQ96S21 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
RAB40CQ96S21 CTNS-201ENST00000046640 2866 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RAB40CQ96S21 HS6ST1-201ENST00000259241 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RAB40CQ96S21 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
RAB40CQ96S21 TEX35-203ENST00000367641 2377 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
RAB40CQ96S21 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RAB40CQ96S21 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RAB40CQ96S21 FAM90A7P-201ENST00000382628 1395 ntBASIC10.99□□□□□ -0.65
RAB40CQ96S21 FAM90A23P-201ENST00000400136 1395 ntBASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms