Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 AC135782.3-201ENST00000562782 2105 ntBASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 FAM226B-201ENST00000602508 1490 ntBASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 SNORD23-201ENST00000408876 110 ntBASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 AC027612.2-202ENST00000445955 1199 ntBASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 MIR2278-201ENST00000516344 96 ntBASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 AC120498.7-201ENST00000562876 330 ntBASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 ANKRD26P1-203ENST00000569528 966 ntBASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHKBP1Q8TBC3 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 AC073869.1-201ENST00000415574 2762 ntBASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 HDGF-202ENST00000368206 960 ntTSL 5 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 AL357373.1-201ENST00000394974 322 ntBASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 CCND3P1-201ENST00000438347 580 ntBASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 AC092612.1-201ENST00000514501 998 ntBASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 OR4A49P-201ENST00000527050 632 ntBASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 PHBP18-201ENST00000546648 813 ntBASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 AC004801.1-201ENST00000549557 360 ntBASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 MIR5091-201ENST00000578707 93 ntBASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 MME-218ENST00000625667 363 ntTSL 5 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.13□□□□□ -0.15
SHKBP1Q8TBC3 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms