Protein–RNA interactions for Protein: P62807

HIST1H2BC, Histone H2B type 1-C/E/F/G/I, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BCP62807 LINC00115-201ENST00000473798 1317 ntBASIC10.04□□□□□ -0.8
HIST1H2BCP62807 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC10.04□□□□□ -0.8
HIST1H2BCP62807 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
HIST1H2BCP62807 ZCWPW1-208ENST00000490721 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
HIST1H2BCP62807 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
HIST1H2BCP62807 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC10.04□□□□□ -0.8
HIST1H2BCP62807 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
HIST1H2BCP62807 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
HIST1H2BCP62807 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
HIST1H2BCP62807 HNRNPF-203ENST00000357065 2617 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 ANKRD26P1-201ENST00000566201 3921 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 PCAT29-201ENST00000558411 2121 ntTSL 2 BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 BORCS7-201ENST00000339834 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 AC139099.1-202ENST00000574098 2409 ntBASIC10.03□□□□□ -0.8
HIST1H2BCP62807 SLC26A4-201ENST00000265715 4930 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 ADGRE2-209ENST00000596991 2596 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 IFT81-209ENST00000552912 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 ASIC1-208ENST00000552438 3327 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 LPGAT1-202ENST00000366997 7782 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 NARS-201ENST00000256854 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 CLCC1-207ENST00000369976 2468 ntTSL 2 BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 INPP5B-203ENST00000373024 3060 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 NME1-NME2-201ENST00000376392 894 ntTSL 5 BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 SLC27A6-202ENST00000395266 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 BX842568.4-201ENST00000421222 227 ntBASIC10.03□□□□□ -0.8
HIST1H2BCP62807 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 BTN2A2-204ENST00000432533 1570 ntTSL 2 BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 ATP5G2P1-201ENST00000433580 426 ntBASIC10.03□□□□□ -0.8
HIST1H2BCP62807 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 AL137779.3-201ENST00000553295 729 ntBASIC10.03□□□□□ -0.8
HIST1H2BCP62807 SPDYE22P-201ENST00000582158 798 ntBASIC10.03□□□□□ -0.8
HIST1H2BCP62807 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 AL589739.1-201ENST00000607720 493 ntBASIC10.03□□□□□ -0.8
HIST1H2BCP62807 AC026120.1-201ENST00000611536 926 ntBASIC10.03□□□□□ -0.8
HIST1H2BCP62807 L3MBTL1-202ENST00000373134 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 STRADA-203ENST00000375840 2209 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 AL162591.1-201ENST00000424435 1756 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 ANKEF1-202ENST00000378392 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 GRK1-201ENST00000335678 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 TARS2-204ENST00000369064 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 BCL11A-202ENST00000356842 3959 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 FKBP4P6-201ENST00000457486 1332 ntBASIC10.03□□□□□ -0.8
HIST1H2BCP62807 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 TKTL1-201ENST00000369912 2566 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 PIK3CD-201ENST00000361110 3508 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 PDE6B-212ENST00000496514 3232 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 USP14-208ENST00000582707 1803 ntTSL 5 BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 TM9SF2-201ENST00000376387 3430 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
HIST1H2BCP62807 AC009133.3-201ENST00000565600 1656 ntTSL 5 BASIC10.02□□□□□ -0.8
HIST1H2BCP62807 MAN1C1-202ENST00000374329 2461 ntTSL 2 BASIC10.02□□□□□ -0.8
HIST1H2BCP62807 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
HIST1H2BCP62807 ANXA11-205ENST00000438331 6965 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
HIST1H2BCP62807 UBR4-203ENST00000375225 1533 ntTSL 2 BASIC10.02□□□□□ -0.8
HIST1H2BCP62807 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
HIST1H2BCP62807 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC10.02□□□□□ -0.8
HIST1H2BCP62807 ETS2-202ENST00000360938 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
HIST1H2BCP62807 TCOF1-205ENST00000439160 4644 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
HIST1H2BCP62807 KIFAP3-206ENST00000538366 3159 ntTSL 2 BASIC10.02□□□□□ -0.8
HIST1H2BCP62807 AC008543.5-201ENST00000589227 2515 ntBASIC10.02□□□□□ -0.8
HIST1H2BCP62807 LRP2-202ENST00000443831 4007 ntTSL 2 BASIC10.02□□□□□ -0.8
HIST1H2BCP62807 PLEC-201ENST00000322810 15249 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
HIST1H2BCP62807 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
HIST1H2BCP62807 PUM1-202ENST00000373741 4242 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
HIST1H2BCP62807 HTR4-201ENST00000360693 3082 ntTSL 5 BASIC10.02□□□□□ -0.81
HIST1H2BCP62807 TRUB1-201ENST00000298746 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
HIST1H2BCP62807 CYP11B2-201ENST00000323110 2936 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
HIST1H2BCP62807 SMIM8-204ENST00000392863 2437 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
HIST1H2BCP62807 KY-205ENST00000508956 2422 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
HIST1H2BCP62807 KLLN-201ENST00000445946 4277 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
HIST1H2BCP62807 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC10.02□□□□□ -0.81
HIST1H2BCP62807 DPY19L3-201ENST00000342179 6015 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
HIST1H2BCP62807 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
HIST1H2BCP62807 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC10.02□□□□□ -0.81
HIST1H2BCP62807 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
HIST1H2BCP62807 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC10.02□□□□□ -0.81
HIST1H2BCP62807 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC10.02□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms