Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
O00370 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
O00370 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
O00370 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC14.41□□□□□ -0.1
O00370 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC14.41□□□□□ -0.1
O00370 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
O00370 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
O00370 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
O00370 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
O00370 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.4□□□□□ -0.1
O00370 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
O00370 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
O00370 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
O00370 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
O00370 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC14.4□□□□□ -0.1
O00370 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
O00370 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
O00370 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
O00370 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
O00370 FUCA1P1-201ENST00000374476 1351 ntBASIC14.4□□□□□ -0.1
O00370 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
O00370 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
O00370 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
O00370 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
O00370 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
O00370 SNORD23-201ENST00000408876 110 ntBASIC14.4□□□□□ -0.1
O00370 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC14.4□□□□□ -0.1
O00370 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC14.4□□□□□ -0.1
O00370 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC14.4□□□□□ -0.1
O00370 GNG10P1-201ENST00000452289 199 ntBASIC14.4□□□□□ -0.1
O00370 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC14.4□□□□□ -0.1
O00370 RPS2P36-201ENST00000456516 831 ntBASIC14.4□□□□□ -0.1
O00370 AP003398.1-201ENST00000531124 318 ntBASIC14.4□□□□□ -0.1
O00370 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
O00370 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC14.4□□□□□ -0.1
O00370 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC14.4□□□□□ -0.1
O00370 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC14.4□□□□□ -0.1
O00370 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
O00370 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
O00370 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
O00370 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
O00370 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
O00370 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC14.4□□□□□ -0.1
O00370 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
O00370 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
O00370 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
O00370 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC14.4□□□□□ -0.1
O00370 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
O00370 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
O00370 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC14.4□□□□□ -0.1
O00370 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC14.4□□□□□ -0.1
O00370 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
O00370 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
O00370 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
O00370 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
O00370 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
O00370 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
O00370 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
O00370 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
O00370 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
O00370 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
O00370 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
O00370 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
O00370 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
O00370 AGGF1P10-201ENST00000635005 2191 ntBASIC14.39□□□□□ -0.11
O00370 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
O00370 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
O00370 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
O00370 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
O00370 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
O00370 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
O00370 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
O00370 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC14.39□□□□□ -0.11
O00370 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC14.39□□□□□ -0.11
O00370 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC14.39□□□□□ -0.11
O00370 AC093826.1-201ENST00000508655 993 ntBASIC14.39□□□□□ -0.11
O00370 RPS23-207ENST00000511844 530 ntTSL 2 BASIC14.39□□□□□ -0.11
O00370 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
O00370 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
O00370 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC14.39□□□□□ -0.11
O00370 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC14.39□□□□□ -0.11
O00370 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
O00370 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
O00370 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
O00370 GBAP1-208ENST00000566701 1546 ntBASIC14.39□□□□□ -0.11
O00370 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
O00370 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
O00370 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC14.39□□□□□ -0.11
O00370 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
O00370 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
O00370 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC14.39□□□□□ -0.11
O00370 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
O00370 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC14.39□□□□□ -0.11
O00370 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
O00370 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.39□□□□□ -0.11
O00370 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
O00370 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
O00370 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
O00370 RBM22P2-201ENST00000393978 1814 ntBASIC14.38□□□□□ -0.11
O00370 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms