Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 RCC2P5-201ENST00000492126 1487 ntBASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 COX20P1-201ENST00000366529 357 ntBASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 MIR566-201ENST00000385187 94 ntBASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 AC079250.1-201ENST00000456046 531 ntBASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 AC104212.2-201ENST00000478813 628 ntBASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 RN7SL288P-201ENST00000490496 291 ntBASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 TBC1D3P6-201ENST00000505954 962 ntBASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 CYP4F36P-201ENST00000589193 186 ntBASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 AC073869.4-201ENST00000620841 800 ntBASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 AC245140.2-201ENST00000624054 1939 ntBASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 AC105206.1-202ENST00000314927 2368 ntBASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NPIPA3F8WFD2 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
NPIPA3F8WFD2 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
NPIPA3F8WFD2 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
NPIPA3F8WFD2 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC12.33□□□□□ -0.44
NPIPA3F8WFD2 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms