Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC13.37□□□□□ -0.27
SATB2Q9UPW6 MBP-238ENST00000580402 915 ntTSL 5 BASIC13.37□□□□□ -0.27
SATB2Q9UPW6 RN7SL455P-201ENST00000580629 282 ntBASIC13.37□□□□□ -0.27
SATB2Q9UPW6 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC13.37□□□□□ -0.27
SATB2Q9UPW6 NAV1-210ENST00000593583 726 ntBASIC13.37□□□□□ -0.27
SATB2Q9UPW6 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC13.37□□□□□ -0.27
SATB2Q9UPW6 AP000769.1-203ENST00000637245 208 ntBASIC13.37□□□□□ -0.27
SATB2Q9UPW6 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SATB2Q9UPW6 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
SATB2Q9UPW6 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SATB2Q9UPW6 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SATB2Q9UPW6 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SATB2Q9UPW6 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SATB2Q9UPW6 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SATB2Q9UPW6 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC13.37□□□□□ -0.27
SATB2Q9UPW6 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
SATB2Q9UPW6 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SATB2Q9UPW6 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SATB2Q9UPW6 AL157996.1-201ENST00000624684 2299 ntBASIC13.37□□□□□ -0.27
SATB2Q9UPW6 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SATB2Q9UPW6 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SATB2Q9UPW6 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
SATB2Q9UPW6 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SATB2Q9UPW6 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.37□□□□□ -0.27
SATB2Q9UPW6 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SATB2Q9UPW6 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
SATB2Q9UPW6 TBC1D27-202ENST00000424239 1573 ntBASIC13.37□□□□□ -0.27
SATB2Q9UPW6 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 AP002008.2-201ENST00000635926 4870 ntBASIC13.36□□□□□ -0.27
SATB2Q9UPW6 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 FKBP4P8-201ENST00000610931 1369 ntBASIC13.36□□□□□ -0.27
SATB2Q9UPW6 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 AL357373.1-201ENST00000394974 322 ntBASIC13.36□□□□□ -0.27
SATB2Q9UPW6 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 HNRNPA1P58-201ENST00000403629 610 ntBASIC13.36□□□□□ -0.27
SATB2Q9UPW6 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 KRT18P15-201ENST00000458108 1291 ntBASIC13.36□□□□□ -0.27
SATB2Q9UPW6 HNRNPA1P56-201ENST00000505767 954 ntBASIC13.36□□□□□ -0.27
SATB2Q9UPW6 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 AC092862.1-201ENST00000541534 533 ntBASIC13.36□□□□□ -0.27
SATB2Q9UPW6 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 KRT18P8-201ENST00000581937 1246 ntBASIC13.36□□□□□ -0.27
SATB2Q9UPW6 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 AC023794.5-201ENST00000564380 2157 ntBASIC13.36□□□□□ -0.27
SATB2Q9UPW6 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 SNIP1-201ENST00000296215 4605 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 AC138761.6-201ENST00000583997 1423 ntBASIC13.36□□□□□ -0.27
SATB2Q9UPW6 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SATB2Q9UPW6 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SATB2Q9UPW6 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.35□□□□□ -0.27
SATB2Q9UPW6 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.35□□□□□ -0.27
SATB2Q9UPW6 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SATB2Q9UPW6 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.35□□□□□ -0.27
SATB2Q9UPW6 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SATB2Q9UPW6 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SATB2Q9UPW6 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SATB2Q9UPW6 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SATB2Q9UPW6 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SATB2Q9UPW6 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SATB2Q9UPW6 HECW1-201ENST00000395891 9501 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SATB2Q9UPW6 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SATB2Q9UPW6 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SATB2Q9UPW6 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SATB2Q9UPW6 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms