Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HLA-DOAP06340 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DOAP06340 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
HLA-DOAP06340 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DOAP06340 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DOAP06340 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DOAP06340 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DOAP06340 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DOAP06340 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DOAP06340 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HLA-DOAP06340 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
HLA-DOAP06340 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC15.8■□□□□ 0.12
HLA-DOAP06340 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DOAP06340 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DOAP06340 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC15.8■□□□□ 0.12
HLA-DOAP06340 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DOAP06340 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DOAP06340 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DOAP06340 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DOAP06340 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC15.8■□□□□ 0.12
HLA-DOAP06340 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DOAP06340 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DOAP06340 TUBB2BP1-201ENST00000404155 871 ntBASIC15.8■□□□□ 0.12
HLA-DOAP06340 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC15.8■□□□□ 0.12
HLA-DOAP06340 PSME2P2-201ENST00000453033 700 ntBASIC15.8■□□□□ 0.12
HLA-DOAP06340 AC233724.9-201ENST00000511694 407 ntBASIC15.8■□□□□ 0.12
HLA-DOAP06340 AC004923.3-201ENST00000527532 355 ntBASIC15.8■□□□□ 0.12
HLA-DOAP06340 AC027139.1-201ENST00000565286 951 ntBASIC15.8■□□□□ 0.12
HLA-DOAP06340 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC15.8■□□□□ 0.12
HLA-DOAP06340 CCND3P2-201ENST00000579393 537 ntBASIC15.8■□□□□ 0.12
HLA-DOAP06340 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DOAP06340 AC026304.1-201ENST00000597953 561 ntBASIC15.8■□□□□ 0.12
HLA-DOAP06340 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DOAP06340 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC15.8■□□□□ 0.12
HLA-DOAP06340 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC15.8■□□□□ 0.12
HLA-DOAP06340 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DOAP06340 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DOAP06340 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DOAP06340 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DOAP06340 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DOAP06340 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DOAP06340 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DOAP06340 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
HLA-DOAP06340 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DOAP06340 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DOAP06340 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DOAP06340 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DOAP06340 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
HLA-DOAP06340 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
HLA-DOAP06340 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DOAP06340 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DOAP06340 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
HLA-DOAP06340 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DOAP06340 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DOAP06340 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DOAP06340 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DOAP06340 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DOAP06340 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DOAP06340 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DOAP06340 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC15.79■□□□□ 0.12
HLA-DOAP06340 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DOAP06340 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DOAP06340 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DOAP06340 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC15.79■□□□□ 0.12
HLA-DOAP06340 AC135782.3-201ENST00000562782 2105 ntBASIC15.79■□□□□ 0.12
HLA-DOAP06340 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DOAP06340 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DOAP06340 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
HLA-DOAP06340 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HLA-DOAP06340 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HLA-DOAP06340 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DOAP06340 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DOAP06340 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DOAP06340 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DOAP06340 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DOAP06340 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DOAP06340 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DOAP06340 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
HLA-DOAP06340 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DOAP06340 EEF1DP5-201ENST00000431410 772 ntBASIC15.79■□□□□ 0.12
HLA-DOAP06340 AC023906.1-201ENST00000486386 453 ntBASIC15.79■□□□□ 0.12
HLA-DOAP06340 AC114812.4-201ENST00000506676 757 ntBASIC15.79■□□□□ 0.12
HLA-DOAP06340 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DOAP06340 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DOAP06340 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC15.79■□□□□ 0.12
HLA-DOAP06340 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC15.79■□□□□ 0.12
HLA-DOAP06340 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC15.79■□□□□ 0.12
HLA-DOAP06340 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC15.79■□□□□ 0.12
HLA-DOAP06340 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC15.79■□□□□ 0.12
HLA-DOAP06340 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HLA-DOAP06340 DUX4L33-201ENST00000635217 958 ntBASIC15.79■□□□□ 0.12
HLA-DOAP06340 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.79■□□□□ 0.12
HLA-DOAP06340 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HLA-DOAP06340 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DOAP06340 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DOAP06340 MIR193BHG-211ENST00000641433 5365 ntBASIC15.79■□□□□ 0.12
HLA-DOAP06340 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DOAP06340 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
HLA-DOAP06340 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DOAP06340 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms