Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.47□□□□□ -0.41
RFC3P40938 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC12.47□□□□□ -0.41
RFC3P40938 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.47□□□□□ -0.41
RFC3P40938 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.47□□□□□ -0.41
RFC3P40938 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.47□□□□□ -0.41
RFC3P40938 TRIM80P-201ENST00000455685 2848 ntBASIC12.47□□□□□ -0.41
RFC3P40938 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFC3P40938 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RFC3P40938 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC12.47□□□□□ -0.41
RFC3P40938 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RFC3P40938 PSAT1P2-201ENST00000426107 972 ntBASIC12.47□□□□□ -0.41
RFC3P40938 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC12.47□□□□□ -0.41
RFC3P40938 AC007279.1-201ENST00000448547 837 ntBASIC12.47□□□□□ -0.41
RFC3P40938 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC12.47□□□□□ -0.41
RFC3P40938 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC12.47□□□□□ -0.41
RFC3P40938 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC12.47□□□□□ -0.41
RFC3P40938 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
RFC3P40938 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
RFC3P40938 PEBP1P2-201ENST00000603980 558 ntBASIC12.47□□□□□ -0.41
RFC3P40938 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
RFC3P40938 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RFC3P40938 CR392039.2-201ENST00000623182 509 ntBASIC12.47□□□□□ -0.41
RFC3P40938 AC026336.4-201ENST00000624565 1050 ntBASIC12.47□□□□□ -0.41
RFC3P40938 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFC3P40938 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC12.47□□□□□ -0.41
RFC3P40938 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFC3P40938 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RFC3P40938 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
RFC3P40938 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
RFC3P40938 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFC3P40938 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFC3P40938 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RFC3P40938 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
RFC3P40938 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RFC3P40938 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFC3P40938 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RFC3P40938 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFC3P40938 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC12.47□□□□□ -0.41
RFC3P40938 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFC3P40938 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFC3P40938 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.47□□□□□ -0.41
RFC3P40938 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFC3P40938 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFC3P40938 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFC3P40938 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFC3P40938 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RFC3P40938 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
RFC3P40938 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RFC3P40938 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.46□□□□□ -0.41
RFC3P40938 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RFC3P40938 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.46□□□□□ -0.41
RFC3P40938 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RFC3P40938 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
RFC3P40938 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.46□□□□□ -0.41
RFC3P40938 AC004241.5-201ENST00000623870 2448 ntBASIC12.46□□□□□ -0.41
RFC3P40938 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC12.46□□□□□ -0.41
RFC3P40938 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
RFC3P40938 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RFC3P40938 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RFC3P40938 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC12.46□□□□□ -0.41
RFC3P40938 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RFC3P40938 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC12.46□□□□□ -0.41
RFC3P40938 OR51A9P-201ENST00000422578 911 ntBASIC12.46□□□□□ -0.41
RFC3P40938 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC12.46□□□□□ -0.41
RFC3P40938 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RFC3P40938 AL135901.1-201ENST00000451812 333 ntBASIC12.46□□□□□ -0.41
RFC3P40938 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC12.46□□□□□ -0.41
RFC3P40938 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RFC3P40938 AC079250.1-201ENST00000456046 531 ntBASIC12.46□□□□□ -0.41
RFC3P40938 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC12.46□□□□□ -0.41
RFC3P40938 AC104212.2-201ENST00000478813 628 ntBASIC12.46□□□□□ -0.41
RFC3P40938 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RFC3P40938 PFN2-212ENST00000490975 858 ntTSL 4 BASIC12.46□□□□□ -0.41
RFC3P40938 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RFC3P40938 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC12.46□□□□□ -0.41
RFC3P40938 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC12.46□□□□□ -0.41
RFC3P40938 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC12.46□□□□□ -0.41
RFC3P40938 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RFC3P40938 AC005357.2-202ENST00000590507 1060 ntBASIC12.46□□□□□ -0.41
RFC3P40938 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
RFC3P40938 AC244250.3-201ENST00000620749 366 ntBASIC12.46□□□□□ -0.41
RFC3P40938 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC12.46□□□□□ -0.41
RFC3P40938 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC12.46□□□□□ -0.41
RFC3P40938 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC12.46□□□□□ -0.41
RFC3P40938 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.46□□□□□ -0.41
RFC3P40938 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RFC3P40938 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RFC3P40938 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RFC3P40938 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RFC3P40938 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RFC3P40938 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.42
RFC3P40938 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RFC3P40938 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RFC3P40938 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RFC3P40938 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.46□□□□□ -0.42
RFC3P40938 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
RFC3P40938 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.46□□□□□ -0.42
RFC3P40938 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RFC3P40938 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.46□□□□□ -0.42
RFC3P40938 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms