Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 STIM1-209ENST00000527651 2184 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TPM2P07951 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPM2P07951 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPM2P07951 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TPM2P07951 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC15.5■□□□□ 0.07
TPM2P07951 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPM2P07951 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC15.5■□□□□ 0.07
TPM2P07951 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPM2P07951 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC15.5■□□□□ 0.07
TPM2P07951 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC15.5■□□□□ 0.07
TPM2P07951 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC15.5■□□□□ 0.07
TPM2P07951 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TPM2P07951 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TPM2P07951 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TPM2P07951 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TPM2P07951 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TPM2P07951 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TPM2P07951 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TPM2P07951 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC15.49■□□□□ 0.07
TPM2P07951 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TPM2P07951 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TPM2P07951 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TPM2P07951 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TPM2P07951 ZNF674-201ENST00000414387 2274 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
TPM2P07951 CCNA1-201ENST00000255465 1879 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TPM2P07951 SLC25A5-AS1-203ENST00000446986 1874 ntTSL 2 BASIC15.49■□□□□ 0.07
TPM2P07951 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TPM2P07951 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
TPM2P07951 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TPM2P07951 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TPM2P07951 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TPM2P07951 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TPM2P07951 XBP1P1-201ENST00000436573 652 ntBASIC15.49■□□□□ 0.07
TPM2P07951 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.49■□□□□ 0.07
TPM2P07951 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.49■□□□□ 0.07
TPM2P07951 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.49■□□□□ 0.07
TPM2P07951 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.49■□□□□ 0.07
TPM2P07951 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.49■□□□□ 0.07
TPM2P07951 AC106886.1-201ENST00000568660 600 ntBASIC15.49■□□□□ 0.07
TPM2P07951 MIR4741-201ENST00000579822 90 ntBASIC15.49■□□□□ 0.07
TPM2P07951 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.49■□□□□ 0.07
TPM2P07951 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.49■□□□□ 0.07
TPM2P07951 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.49■□□□□ 0.07
TPM2P07951 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
TPM2P07951 AP000346.4-201ENST00000614827 381 ntBASIC15.49■□□□□ 0.07
TPM2P07951 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC15.49■□□□□ 0.07
TPM2P07951 PXK-210ENST00000479241 2817 ntTSL 2 BASIC15.49■□□□□ 0.07
TPM2P07951 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TPM2P07951 SLC44A4-210ENST00000544672 2634 ntTSL 2 BASIC15.49■□□□□ 0.07
TPM2P07951 APOL3-205ENST00000397293 2214 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TPM2P07951 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TPM2P07951 HECW1-IT1-201ENST00000322220 1839 ntTSL 2 BASIC15.49■□□□□ 0.07
TPM2P07951 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TPM2P07951 IL17REL-201ENST00000341280 3500 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TPM2P07951 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TPM2P07951 GRM8-201ENST00000339582 4057 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
TPM2P07951 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TPM2P07951 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TPM2P07951 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
TPM2P07951 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TPM2P07951 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TPM2P07951 PPP1R26P2-201ENST00000611403 3595 ntBASIC15.49■□□□□ 0.07
TPM2P07951 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TPM2P07951 SLC8A3-207ENST00000528359 2840 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TPM2P07951 SLC8A3-210ENST00000534137 2837 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TPM2P07951 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC15.48■□□□□ 0.07
TPM2P07951 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM2P07951 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM2P07951 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM2P07951 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM2P07951 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC15.48■□□□□ 0.07
TPM2P07951 RTFDC1-202ENST00000357348 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM2P07951 CPT1C-203ENST00000392518 2910 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
TPM2P07951 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM2P07951 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.48■□□□□ 0.07
TPM2P07951 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.48■□□□□ 0.07
TPM2P07951 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC15.48■□□□□ 0.07
TPM2P07951 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM2P07951 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM2P07951 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM2P07951 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM2P07951 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TPM2P07951 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
TPM2P07951 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM2P07951 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.48■□□□□ 0.07
TPM2P07951 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.48■□□□□ 0.07
TPM2P07951 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC15.48■□□□□ 0.07
TPM2P07951 HMGN1P19-201ENST00000436976 333 ntBASIC15.48■□□□□ 0.07
TPM2P07951 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.48■□□□□ 0.07
TPM2P07951 MLF1-209ENST00000482628 1050 ntTSL 5 BASIC15.48■□□□□ 0.07
TPM2P07951 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.48■□□□□ 0.07
TPM2P07951 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.48■□□□□ 0.07
TPM2P07951 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.48■□□□□ 0.07
TPM2P07951 AL023803.2-201ENST00000620080 638 ntBASIC15.48■□□□□ 0.07
TPM2P07951 AC092299.1-201ENST00000632679 757 ntBASIC15.48■□□□□ 0.07
TPM2P07951 PHLPP2-204ENST00000567016 4812 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TPM2P07951 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM2P07951 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TPM2P07951 ESPNL-203ENST00000409506 3610 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TPM2P07951 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms