Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APPP05067 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
APPP05067 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC16.31■□□□□ 0.2
APPP05067 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
APPP05067 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
APPP05067 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
APPP05067 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APPP05067 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APPP05067 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC16.31■□□□□ 0.2
APPP05067 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
APPP05067 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APPP05067 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APPP05067 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC16.31■□□□□ 0.2
APPP05067 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
APPP05067 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
APPP05067 LDHBP1-201ENST00000455730 1119 ntBASIC16.31■□□□□ 0.2
APPP05067 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
APPP05067 AC104212.2-201ENST00000478813 628 ntBASIC16.31■□□□□ 0.2
APPP05067 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC16.31■□□□□ 0.2
APPP05067 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.31■□□□□ 0.2
APPP05067 AC013553.1-201ENST00000560906 267 ntBASIC16.31■□□□□ 0.2
APPP05067 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC16.31■□□□□ 0.2
APPP05067 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC16.31■□□□□ 0.2
APPP05067 AC138466.5-201ENST00000624002 808 ntBASIC16.31■□□□□ 0.2
APPP05067 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
APPP05067 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC16.31■□□□□ 0.2
APPP05067 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC16.31■□□□□ 0.2
APPP05067 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC16.31■□□□□ 0.2
APPP05067 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC16.31■□□□□ 0.2
APPP05067 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
APPP05067 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
APPP05067 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
APPP05067 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC16.31■□□□□ 0.2
APPP05067 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
APPP05067 AL513497.1-201ENST00000624273 2083 ntBASIC16.31■□□□□ 0.2
APPP05067 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
APPP05067 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
APPP05067 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC16.31■□□□□ 0.2
APPP05067 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
APPP05067 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC16.31■□□□□ 0.2
APPP05067 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APPP05067 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
APPP05067 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APPP05067 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
APPP05067 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
APPP05067 AC025271.4-201ENST00000621477 1726 ntBASIC16.31■□□□□ 0.2
APPP05067 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
APPP05067 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APPP05067 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
APPP05067 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC16.3■□□□□ 0.2
APPP05067 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APPP05067 AC024075.2-201ENST00000598112 1473 ntBASIC16.3■□□□□ 0.2
APPP05067 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC16.3■□□□□ 0.2
APPP05067 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APPP05067 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
APPP05067 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APPP05067 PI4KAP2-201ENST00000360806 2080 ntBASIC16.3■□□□□ 0.2
APPP05067 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
APPP05067 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APPP05067 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
APPP05067 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APPP05067 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
APPP05067 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APPP05067 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APPP05067 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.3■□□□□ 0.2
APPP05067 AC093826.1-201ENST00000508655 993 ntBASIC16.3■□□□□ 0.2
APPP05067 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC16.3■□□□□ 0.2
APPP05067 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.3■□□□□ 0.2
APPP05067 PIGCP1-201ENST00000527583 895 ntBASIC16.3■□□□□ 0.2
APPP05067 DLK1-205ENST00000556051 469 ntTSL 2 BASIC16.3■□□□□ 0.2
APPP05067 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC16.3■□□□□ 0.2
APPP05067 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC16.3■□□□□ 0.2
APPP05067 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APPP05067 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC16.3■□□□□ 0.2
APPP05067 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
APPP05067 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC16.3■□□□□ 0.2
APPP05067 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APPP05067 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
APPP05067 AC008040.5-201ENST00000599781 1781 ntBASIC16.3■□□□□ 0.2
APPP05067 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APPP05067 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APPP05067 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APPP05067 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APPP05067 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APPP05067 CARS-214ENST00000529772 2637 ntTSL 2 BASIC16.3■□□□□ 0.2
APPP05067 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
APPP05067 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APPP05067 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
APPP05067 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APPP05067 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APPP05067 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APPP05067 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
APPP05067 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APPP05067 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APPP05067 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
APPP05067 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
APPP05067 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APPP05067 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC16.29■□□□□ 0.2
APPP05067 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC16.29■□□□□ 0.2
APPP05067 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms