Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHL1O00533 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC17.12■□□□□ 0.33
CHL1O00533 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC17.12■□□□□ 0.33
CHL1O00533 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC17.12■□□□□ 0.33
CHL1O00533 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHL1O00533 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CHL1O00533 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHL1O00533 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHL1O00533 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHL1O00533 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHL1O00533 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHL1O00533 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHL1O00533 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHL1O00533 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHL1O00533 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHL1O00533 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHL1O00533 AC006144.1-201ENST00000424220 1600 ntBASIC17.11■□□□□ 0.33
CHL1O00533 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CHL1O00533 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC17.11■□□□□ 0.33
CHL1O00533 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHL1O00533 LILRB1-202ENST00000396315 2157 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHL1O00533 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHL1O00533 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC17.11■□□□□ 0.33
CHL1O00533 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC17.11■□□□□ 0.33
CHL1O00533 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHL1O00533 AIG1-203ENST00000367596 559 ntTSL 2 BASIC17.11■□□□□ 0.33
CHL1O00533 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC17.11■□□□□ 0.33
CHL1O00533 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CHL1O00533 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC17.11■□□□□ 0.33
CHL1O00533 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC17.11■□□□□ 0.33
CHL1O00533 MYOZ3-205ENST00000520112 605 ntTSL 4 BASIC17.11■□□□□ 0.33
CHL1O00533 CYP2B7P-202ENST00000593298 1087 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHL1O00533 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHL1O00533 AC117500.5-201ENST00000623233 527 ntBASIC17.11■□□□□ 0.33
CHL1O00533 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHL1O00533 AC067750.1-201ENST00000608826 6545 ntBASIC17.11■□□□□ 0.33
CHL1O00533 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHL1O00533 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC17.11■□□□□ 0.33
CHL1O00533 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHL1O00533 GHET1-201ENST00000627071 1906 ntBASIC17.11■□□□□ 0.33
CHL1O00533 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CHL1O00533 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHL1O00533 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHL1O00533 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHL1O00533 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHL1O00533 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHL1O00533 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC17.1■□□□□ 0.33
CHL1O00533 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC17.1■□□□□ 0.33
CHL1O00533 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC17.1■□□□□ 0.33
CHL1O00533 GUCY1B3-207ENST00000513437 2355 ntTSL 2 BASIC17.1■□□□□ 0.33
CHL1O00533 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHL1O00533 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHL1O00533 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHL1O00533 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHL1O00533 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHL1O00533 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.1■□□□□ 0.33
CHL1O00533 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CHL1O00533 FPGT-202ENST00000370898 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHL1O00533 TP73-207ENST00000378290 1831 ntTSL 2 BASIC17.1■□□□□ 0.33
CHL1O00533 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHL1O00533 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHL1O00533 RABL2B-203ENST00000395591 1987 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHL1O00533 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHL1O00533 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHL1O00533 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHL1O00533 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHL1O00533 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC17.1■□□□□ 0.33
CHL1O00533 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC17.1■□□□□ 0.33
CHL1O00533 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC17.1■□□□□ 0.33
CHL1O00533 IDS-203ENST00000428056 1213 ntTSL 2 BASIC17.1■□□□□ 0.33
CHL1O00533 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC17.1■□□□□ 0.33
CHL1O00533 AC120498.7-201ENST00000562876 330 ntBASIC17.1■□□□□ 0.33
CHL1O00533 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC17.1■□□□□ 0.33
CHL1O00533 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC17.1■□□□□ 0.33
CHL1O00533 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHL1O00533 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHL1O00533 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHL1O00533 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHL1O00533 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC17.1■□□□□ 0.33
CHL1O00533 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHL1O00533 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHL1O00533 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHL1O00533 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHL1O00533 SARS2-205ENST00000594171 1631 ntTSL 2 BASIC17.1■□□□□ 0.33
CHL1O00533 LINGO1-AS1-201ENST00000558691 1720 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHL1O00533 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHL1O00533 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC17.1■□□□□ 0.33
CHL1O00533 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
CHL1O00533 ANKRD20A7P-201ENST00000402318 2414 ntBASIC17.09■□□□□ 0.33
CHL1O00533 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC17.09■□□□□ 0.33
CHL1O00533 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHL1O00533 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
CHL1O00533 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHL1O00533 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CHL1O00533 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHL1O00533 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHL1O00533 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHL1O00533 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHL1O00533 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHL1O00533 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 256.7 ms