Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.1□□□□□ -0.47
APOC1P02654 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.1□□□□□ -0.47
APOC1P02654 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 AC015909.3-201ENST00000572855 1794 ntBASIC12.1□□□□□ -0.47
APOC1P02654 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
APOC1P02654 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
APOC1P02654 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC12.1□□□□□ -0.47
APOC1P02654 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC12.1□□□□□ -0.47
APOC1P02654 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC12.1□□□□□ -0.47
APOC1P02654 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 ELK2AP-201ENST00000392510 1007 ntBASIC12.1□□□□□ -0.47
APOC1P02654 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.1□□□□□ -0.47
APOC1P02654 AC005722.1-201ENST00000431878 964 ntBASIC12.1□□□□□ -0.47
APOC1P02654 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC12.1□□□□□ -0.47
APOC1P02654 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 AC006335.1-201ENST00000445200 547 ntBASIC12.1□□□□□ -0.47
APOC1P02654 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.1□□□□□ -0.47
APOC1P02654 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC12.1□□□□□ -0.47
APOC1P02654 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC12.1□□□□□ -0.47
APOC1P02654 AC145285.5-201ENST00000562217 361 ntBASIC12.1□□□□□ -0.47
APOC1P02654 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
APOC1P02654 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.1□□□□□ -0.47
APOC1P02654 AC244452.3-201ENST00000636814 210 ntBASIC12.1□□□□□ -0.47
APOC1P02654 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC12.1□□□□□ -0.47
APOC1P02654 AC110048.1-201ENST00000604293 2157 ntBASIC12.1□□□□□ -0.47
APOC1P02654 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC12.1□□□□□ -0.47
APOC1P02654 EIF3L-214ENST00000624234 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 Z98257.2-202ENST00000641138 1548 ntBASIC12.1□□□□□ -0.47
APOC1P02654 AC010969.2-201ENST00000602458 3231 ntBASIC12.1□□□□□ -0.47
APOC1P02654 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.1□□□□□ -0.47
APOC1P02654 IL1RAP-211ENST00000439062 2244 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
APOC1P02654 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
APOC1P02654 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
APOC1P02654 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 AC040160.2-201ENST00000623816 1675 ntBASIC12.1□□□□□ -0.47
APOC1P02654 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC1P02654 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.1□□□□□ -0.47
APOC1P02654 ZFR-201ENST00000265069 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC1P02654 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
APOC1P02654 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC12.09□□□□□ -0.47
APOC1P02654 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.09□□□□□ -0.47
APOC1P02654 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC1P02654 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC1P02654 KIF25-AS1-202ENST00000456585 2795 ntTSL 2 BASIC12.09□□□□□ -0.47
APOC1P02654 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
APOC1P02654 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC1P02654 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
APOC1P02654 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC1P02654 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.09□□□□□ -0.47
APOC1P02654 LINC00893-215ENST00000618757 2347 ntTSL 2 BASIC12.09□□□□□ -0.47
APOC1P02654 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
APOC1P02654 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC12.09□□□□□ -0.47
APOC1P02654 CCT7P1-201ENST00000406551 1611 ntBASIC12.09□□□□□ -0.47
APOC1P02654 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC1P02654 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC1P02654 LITAF-221ENST00000622633 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC1P02654 GTF2IP13-202ENST00000609439 10247 ntTSL 5 BASIC12.09□□□□□ -0.47
APOC1P02654 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC1P02654 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC1P02654 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC1P02654 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC1P02654 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
APOC1P02654 TUBB2BP1-201ENST00000404155 871 ntBASIC12.09□□□□□ -0.47
APOC1P02654 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.09□□□□□ -0.47
APOC1P02654 ACTBP11-201ENST00000436287 1126 ntBASIC12.09□□□□□ -0.47
APOC1P02654 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.09□□□□□ -0.47
APOC1P02654 AC098934.1-203ENST00000442868 1262 ntBASIC12.09□□□□□ -0.47
APOC1P02654 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC12.09□□□□□ -0.47
APOC1P02654 RPSAP15-201ENST00000448168 861 ntBASIC12.09□□□□□ -0.47
APOC1P02654 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
APOC1P02654 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.09□□□□□ -0.47
APOC1P02654 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.09□□□□□ -0.47
APOC1P02654 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms