Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 AIF1L-204ENST00000372300 3284 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 AC027020.2-201ENST00000602585 2389 ntBASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 ANKRD34A-201ENST00000606888 3613 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 AC005076.1-201ENST00000433446 769 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 AL365203.1-201ENST00000450890 1048 ntTSL 3 BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 AP001889.1-201ENST00000525414 633 ntBASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 C2orf69P2-201ENST00000562032 1123 ntBASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 AL355385.1-201ENST00000606123 409 ntBASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 AC009118.2-201ENST00000613275 655 ntBASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 LINC01447-201ENST00000429010 2761 ntTSL 2 BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 DDC-212ENST00000615193 1674 ntTSL 3 BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 TRIM37-202ENST00000393065 3548 ntTSL 2 BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 LILRA6-203ENST00000396365 1890 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 PKM-222ENST00000568883 1863 ntTSL 5 BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 FP325332.1-201ENST00000624818 2045 ntBASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 AC010969.1-201ENST00000340444 2412 ntTSL 2 BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 CELF2-AS1-201ENST00000379256 2468 ntTSL 2 BASIC13.78□□□□□ -0.2
HMGB1P1B2RPK0 PISD-202ENST00000382151 2669 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
HMGB1P1B2RPK0 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
HMGB1P1B2RPK0 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HMGB1P1B2RPK0 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HMGB1P1B2RPK0 CHMP2B-201ENST00000263780 2557 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 SUOX-203ENST00000394109 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 XBP1P1-201ENST00000436573 652 ntBASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 HMGN1P19-201ENST00000436976 333 ntBASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 TGFBI-201ENST00000442011 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 KRT18P28-201ENST00000453838 1332 ntBASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 IGF2BP2-204ENST00000457616 3426 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 LINC02202-201ENST00000499583 2664 ntTSL 2 BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 RNF214-205ENST00000531287 1706 ntTSL 2 BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 AC007541.1-201ENST00000570282 1469 ntBASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 MIR4783-201ENST00000580343 82 ntBASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 GIMAP1-GIMAP5-201ENST00000611999 2148 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 FGFR1OP-207ENST00000622353 3451 ntTSL 2 BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 TMEM63B-201ENST00000259746 3318 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 NAV2-204ENST00000396087 7882 ntTSL 5 BASIC13.77□□□□□ -0.21
HMGB1P1B2RPK0 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC13.76□□□□□ -0.21
HMGB1P1B2RPK0 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
HMGB1P1B2RPK0 NRF1-201ENST00000223190 2424 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HMGB1P1B2RPK0 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGB1P1B2RPK0 AP002754.1-201ENST00000506329 2349 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HMGB1P1B2RPK0 RTFDC1-202ENST00000357348 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGB1P1B2RPK0 IL1RAP-211ENST00000439062 2244 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms