Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC10.37□□□□□ -0.75
VGLL1Q99990 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC10.37□□□□□ -0.75
VGLL1Q99990 MIR3188-201ENST00000583494 85 ntBASIC10.37□□□□□ -0.75
VGLL1Q99990 AL021707.6-201ENST00000609212 491 ntBASIC10.37□□□□□ -0.75
VGLL1Q99990 AC133552.6-201ENST00000613406 534 ntBASIC10.37□□□□□ -0.75
VGLL1Q99990 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VGLL1Q99990 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VGLL1Q99990 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
VGLL1Q99990 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
VGLL1Q99990 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
VGLL1Q99990 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VGLL1Q99990 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
VGLL1Q99990 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC10.37□□□□□ -0.75
VGLL1Q99990 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC10.37□□□□□ -0.75
VGLL1Q99990 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC10.37□□□□□ -0.75
VGLL1Q99990 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VGLL1Q99990 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VGLL1Q99990 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
VGLL1Q99990 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC10.37□□□□□ -0.75
VGLL1Q99990 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
VGLL1Q99990 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
VGLL1Q99990 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC10.36□□□□□ -0.75
VGLL1Q99990 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
VGLL1Q99990 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC10.36□□□□□ -0.75
VGLL1Q99990 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 PAM-203ENST00000346918 3302 ntTSL 5 BASIC10.36□□□□□ -0.75
VGLL1Q99990 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC10.36□□□□□ -0.75
VGLL1Q99990 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
VGLL1Q99990 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
VGLL1Q99990 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
VGLL1Q99990 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC10.36□□□□□ -0.75
VGLL1Q99990 SSR4P1-201ENST00000415143 412 ntBASIC10.36□□□□□ -0.75
VGLL1Q99990 FAM21FP-201ENST00000426241 1131 ntBASIC10.36□□□□□ -0.75
VGLL1Q99990 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC10.36□□□□□ -0.75
VGLL1Q99990 AC005722.1-201ENST00000431878 964 ntBASIC10.36□□□□□ -0.75
VGLL1Q99990 AC003958.1-201ENST00000435883 421 ntBASIC10.36□□□□□ -0.75
VGLL1Q99990 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 AC007279.1-201ENST00000448547 837 ntBASIC10.36□□□□□ -0.75
VGLL1Q99990 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC10.36□□□□□ -0.75
VGLL1Q99990 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC10.36□□□□□ -0.75
VGLL1Q99990 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC10.36□□□□□ -0.75
VGLL1Q99990 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC10.36□□□□□ -0.75
VGLL1Q99990 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC10.36□□□□□ -0.75
VGLL1Q99990 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC10.36□□□□□ -0.75
VGLL1Q99990 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC10.36□□□□□ -0.75
VGLL1Q99990 ELP5-212ENST00000574255 671 ntTSL 2 BASIC10.36□□□□□ -0.75
VGLL1Q99990 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC10.36□□□□□ -0.75
VGLL1Q99990 MIR3940-201ENST00000579148 102 ntBASIC10.36□□□□□ -0.75
VGLL1Q99990 AL132994.2-201ENST00000603120 687 ntBASIC10.36□□□□□ -0.75
VGLL1Q99990 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
VGLL1Q99990 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC10.36□□□□□ -0.75
VGLL1Q99990 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC10.36□□□□□ -0.75
VGLL1Q99990 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
VGLL1Q99990 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
VGLL1Q99990 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
VGLL1Q99990 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC10.36□□□□□ -0.75
VGLL1Q99990 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC10.36□□□□□ -0.75
VGLL1Q99990 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC10.36□□□□□ -0.75
VGLL1Q99990 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC10.36□□□□□ -0.75
VGLL1Q99990 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
VGLL1Q99990 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VGLL1Q99990 AC027020.2-201ENST00000602585 2389 ntBASIC10.36□□□□□ -0.75
VGLL1Q99990 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms