Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 C2-209ENST00000452323 1999 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 PI4KAP2-201ENST00000360806 2080 ntBASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 AL022328.3-201ENST00000607943 679 ntBASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 KLF17P1-201ENST00000547105 1126 ntBASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 AC132825.4-202ENST00000578792 434 ntBASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 RN7SL219P-201ENST00000582872 296 ntBASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 LAMB3-201ENST00000356082 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC50Q8IVM0 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 CIC-204ENST00000572681 8218 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms