Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42BPAQ5VT25 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42BPAQ5VT25 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CDC42BPAQ5VT25 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CDC42BPAQ5VT25 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CDC42BPAQ5VT25 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 MT1F-201ENST00000334350 690 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 WRB-202ENST00000380708 1464 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 AL807752.1-201ENST00000395082 1322 ntBASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 RABL2A-207ENST00000409875 2282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 AL162595.1-201ENST00000429227 868 ntTSL 5 BASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 AL592463.1-201ENST00000451108 635 ntTSL 3 BASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 RN7SL43P-201ENST00000463926 291 ntBASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 AC092944.1-204ENST00000475102 384 ntTSL 5 BASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 OPRM1-211ENST00000518759 1060 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 AP003062.1-201ENST00000528497 762 ntTSL 3 BASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 KRT18P7-201ENST00000557241 1219 ntBASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 AC051619.6-201ENST00000558039 595 ntTSL 4 BASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 AL133297.2-201ENST00000563162 485 ntTSL 2 BASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 AC006236.1-201ENST00000576249 797 ntBASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 AC105105.4-201ENST00000610389 713 ntBASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 AC080038.2-201ENST00000617734 423 ntBASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 OR10N1P-203ENST00000641736 1305 ntBASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 CDK5RAP3-202ENST00000536708 1975 ntTSL 2 BASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 HMBS-202ENST00000392841 1411 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDC42BPAQ5VT25 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 FAM96A-201ENST00000300030 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 AC234771.1-201ENST00000416873 250 ntTSL 2 BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 TRGV2-201ENST00000426402 544 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 AC006372.1-201ENST00000449903 546 ntTSL 2 BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 SNHG14-207ENST00000452731 1064 ntTSL 5 BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 CHCHD2P6-201ENST00000454346 447 ntBASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 NAA60-236ENST00000577013 575 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 MIR4640-201ENST00000581824 90 ntBASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 RPL26-206ENST00000582556 763 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 LINC00868-203ENST00000592919 853 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 AC242988.1-201ENST00000611044 714 ntTSL 3 BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 UBA3-212ENST00000630585 390 ntTSL 4 BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 LINC01801-202ENST00000590963 2077 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 IGF2BP2-203ENST00000421047 1711 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 OR6F1-203ENST00000641444 1698 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 IL18BP-202ENST00000337131 1606 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 AC104758.3-203ENST00000562938 2123 ntBASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 AL354733.3-201ENST00000448389 390 ntTSL 3 BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDC42BPAQ5VT25 AL355102.3-201ENST00000554299 1678 ntBASIC19.58■□□□□ 0.73
CDC42BPAQ5VT25 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDC42BPAQ5VT25 MYF5-201ENST00000228644 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDC42BPAQ5VT25 ATCAY-205ENST00000600960 2904 ntTSL 5 BASIC19.58■□□□□ 0.73
CDC42BPAQ5VT25 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDC42BPAQ5VT25 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDC42BPAQ5VT25 PSMD13-201ENST00000352303 1427 ntTSL 5 BASIC19.58■□□□□ 0.73
CDC42BPAQ5VT25 CHEK1-203ENST00000428830 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDC42BPAQ5VT25 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDC42BPAQ5VT25 NBR2-202ENST00000460115 1344 ntTSL 2 BASIC19.58■□□□□ 0.73
CDC42BPAQ5VT25 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDC42BPAQ5VT25 CACNA1C-AS1-201ENST00000501371 2191 ntTSL 2 BASIC19.58■□□□□ 0.73
CDC42BPAQ5VT25 TNNT2-201ENST00000236918 1098 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CDC42BPAQ5VT25 RHBDL2-201ENST00000289248 2129 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CDC42BPAQ5VT25 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC19.58■□□□□ 0.72
CDC42BPAQ5VT25 AC007881.1-201ENST00000437460 187 ntBASIC19.58■□□□□ 0.72
CDC42BPAQ5VT25 AL663070.1-201ENST00000438210 725 ntBASIC19.58■□□□□ 0.72
CDC42BPAQ5VT25 PIN1P1-202ENST00000439639 301 ntBASIC19.58■□□□□ 0.72
CDC42BPAQ5VT25 AC108082.1-201ENST00000510857 331 ntBASIC19.58■□□□□ 0.72
CDC42BPAQ5VT25 LINC01194-203ENST00000513051 670 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDC42BPAQ5VT25 EGLN3-209ENST00000553215 1004 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDC42BPAQ5VT25 AC244102.2-201ENST00000597568 955 ntBASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms