Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GPC3P51654 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GPC3P51654 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
GPC3P51654 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GPC3P51654 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
GPC3P51654 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
GPC3P51654 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
GPC3P51654 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.92□□□□□ -0.02
GPC3P51654 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
GPC3P51654 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GPC3P51654 ZNF436-AS1-201ENST00000335648 2547 ntBASIC14.92□□□□□ -0.02
GPC3P51654 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GPC3P51654 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
GPC3P51654 OR7E155P-201ENST00000412208 1014 ntBASIC14.92□□□□□ -0.02
GPC3P51654 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC14.92□□□□□ -0.02
GPC3P51654 RPSAP12-201ENST00000435879 888 ntBASIC14.92□□□□□ -0.02
GPC3P51654 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC14.92□□□□□ -0.02
GPC3P51654 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC14.92□□□□□ -0.02
GPC3P51654 SEPHS2P1-201ENST00000511618 1162 ntBASIC14.92□□□□□ -0.02
GPC3P51654 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC14.92□□□□□ -0.02
GPC3P51654 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC14.92□□□□□ -0.02
GPC3P51654 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC14.92□□□□□ -0.02
GPC3P51654 ABHD17AP9-201ENST00000561925 548 ntBASIC14.92□□□□□ -0.02
GPC3P51654 AL118516.1-201ENST00000564152 670 ntBASIC14.92□□□□□ -0.02
GPC3P51654 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC14.92□□□□□ -0.02
GPC3P51654 AC064850.1-201ENST00000413279 1398 ntBASIC14.92□□□□□ -0.02
GPC3P51654 KRT8P25-201ENST00000473150 1456 ntBASIC14.92□□□□□ -0.02
GPC3P51654 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GPC3P51654 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
GPC3P51654 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GPC3P51654 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GPC3P51654 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GPC3P51654 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GPC3P51654 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
GPC3P51654 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
GPC3P51654 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GPC3P51654 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.92□□□□□ -0.02
GPC3P51654 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.92□□□□□ -0.02
GPC3P51654 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GPC3P51654 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GPC3P51654 AC073862.5-201ENST00000624129 2027 ntBASIC14.92□□□□□ -0.02
GPC3P51654 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GPC3P51654 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GPC3P51654 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC14.92□□□□□ -0.02
GPC3P51654 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
GPC3P51654 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
GPC3P51654 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.91□□□□□ -0.02
GPC3P51654 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC3P51654 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC3P51654 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC14.91□□□□□ -0.02
GPC3P51654 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC3P51654 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC3P51654 AC005252.3-201ENST00000623855 2258 ntBASIC14.91□□□□□ -0.02
GPC3P51654 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC3P51654 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC3P51654 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC3P51654 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GPC3P51654 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC14.91□□□□□ -0.02
GPC3P51654 AC004241.5-201ENST00000623870 2448 ntBASIC14.91□□□□□ -0.02
GPC3P51654 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC3P51654 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
GPC3P51654 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
GPC3P51654 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC3P51654 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC3P51654 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC14.91□□□□□ -0.02
GPC3P51654 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC3P51654 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC14.91□□□□□ -0.02
GPC3P51654 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GPC3P51654 SERF2-204ENST00000402131 586 ntTSL 2 BASIC14.91□□□□□ -0.02
GPC3P51654 MPV17-209ENST00000405983 859 ntTSL 5 BASIC14.91□□□□□ -0.02
GPC3P51654 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC14.91□□□□□ -0.02
GPC3P51654 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC14.91□□□□□ -0.02
GPC3P51654 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC14.91□□□□□ -0.02
GPC3P51654 GOLGA6L16P-201ENST00000441780 1299 ntBASIC14.91□□□□□ -0.02
GPC3P51654 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
GPC3P51654 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GPC3P51654 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC3P51654 PPOX-204ENST00000462866 473 ntTSL 5 BASIC14.91□□□□□ -0.02
GPC3P51654 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
GPC3P51654 AC083801.1-201ENST00000491689 358 ntBASIC14.91□□□□□ -0.02
GPC3P51654 AC112250.1-201ENST00000504640 745 ntBASIC14.91□□□□□ -0.02
GPC3P51654 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GPC3P51654 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC14.91□□□□□ -0.02
GPC3P51654 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC14.91□□□□□ -0.02
GPC3P51654 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC14.91□□□□□ -0.02
GPC3P51654 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC14.91□□□□□ -0.02
GPC3P51654 KF455155.1-201ENST00000604493 303 ntBASIC14.91□□□□□ -0.02
GPC3P51654 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC14.91□□□□□ -0.02
GPC3P51654 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC14.91□□□□□ -0.02
GPC3P51654 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
GPC3P51654 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC3P51654 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC3P51654 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
GPC3P51654 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC3P51654 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.91□□□□□ -0.02
GPC3P51654 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC3P51654 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
GPC3P51654 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.91□□□□□ -0.02
GPC3P51654 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC3P51654 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms