Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 CIC-204ENST00000572681 8218 ntTSL 5 BASIC13.26□□□□□ -0.29
AP1S2P56377 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S2P56377 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
AP1S2P56377 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S2P56377 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S2P56377 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S2P56377 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S2P56377 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S2P56377 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S2P56377 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S2P56377 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S2P56377 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
AP1S2P56377 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S2P56377 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S2P56377 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.25□□□□□ -0.29
AP1S2P56377 AC131902.2-201ENST00000566892 2172 ntBASIC13.25□□□□□ -0.29
AP1S2P56377 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC13.25□□□□□ -0.29
AP1S2P56377 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S2P56377 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S2P56377 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC13.25□□□□□ -0.29
AP1S2P56377 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S2P56377 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S2P56377 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S2P56377 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
AP1S2P56377 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S2P56377 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S2P56377 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S2P56377 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S2P56377 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S2P56377 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.25□□□□□ -0.29
AP1S2P56377 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S2P56377 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S2P56377 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S2P56377 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC13.25□□□□□ -0.29
AP1S2P56377 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC13.25□□□□□ -0.29
AP1S2P56377 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.25□□□□□ -0.29
AP1S2P56377 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S2P56377 EEF1DP6-201ENST00000449232 372 ntBASIC13.25□□□□□ -0.29
AP1S2P56377 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S2P56377 FOS-204ENST00000554617 796 ntTSL 2 BASIC13.25□□□□□ -0.29
AP1S2P56377 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC13.25□□□□□ -0.29
AP1S2P56377 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S2P56377 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13.25□□□□□ -0.29
AP1S2P56377 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
AP1S2P56377 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S2P56377 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
AP1S2P56377 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S2P56377 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S2P56377 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S2P56377 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S2P56377 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S2P56377 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S2P56377 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S2P56377 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC13.25□□□□□ -0.29
AP1S2P56377 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC13.25□□□□□ -0.29
AP1S2P56377 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S2P56377 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S2P56377 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S2P56377 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S2P56377 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S2P56377 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
AP1S2P56377 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC13.24□□□□□ -0.29
AP1S2P56377 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
AP1S2P56377 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC13.24□□□□□ -0.29
AP1S2P56377 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S2P56377 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.24□□□□□ -0.29
AP1S2P56377 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S2P56377 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC13.24□□□□□ -0.29
AP1S2P56377 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC13.24□□□□□ -0.29
AP1S2P56377 AC060814.4-201ENST00000594169 2163 ntBASIC13.24□□□□□ -0.29
AP1S2P56377 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.24□□□□□ -0.29
AP1S2P56377 AP000437.1-201ENST00000624057 2085 ntBASIC13.24□□□□□ -0.29
AP1S2P56377 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S2P56377 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S2P56377 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S2P56377 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC13.24□□□□□ -0.29
AP1S2P56377 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
AP1S2P56377 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S2P56377 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
AP1S2P56377 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S2P56377 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC13.24□□□□□ -0.29
AP1S2P56377 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S2P56377 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC13.24□□□□□ -0.29
AP1S2P56377 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC13.24□□□□□ -0.29
AP1S2P56377 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC13.24□□□□□ -0.29
AP1S2P56377 EEF1GP8-201ENST00000506566 1154 ntBASIC13.24□□□□□ -0.29
AP1S2P56377 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC13.24□□□□□ -0.29
AP1S2P56377 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC13.24□□□□□ -0.29
AP1S2P56377 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC13.24□□□□□ -0.29
AP1S2P56377 AC105129.2-201ENST00000559536 390 ntBASIC13.24□□□□□ -0.29
AP1S2P56377 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC13.24□□□□□ -0.29
AP1S2P56377 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC13.24□□□□□ -0.29
AP1S2P56377 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.24□□□□□ -0.29
AP1S2P56377 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC13.24□□□□□ -0.29
AP1S2P56377 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC13.24□□□□□ -0.29
AP1S2P56377 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.24□□□□□ -0.29
AP1S2P56377 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
AP1S2P56377 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S2P56377 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.24□□□□□ -0.29
AP1S2P56377 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms