Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
APOA4P06727 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC13.68□□□□□ -0.22
APOA4P06727 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC13.68□□□□□ -0.22
APOA4P06727 AC138701.2-201ENST00000553634 226 ntBASIC13.68□□□□□ -0.22
APOA4P06727 CHMP4BP1-201ENST00000556017 588 ntBASIC13.68□□□□□ -0.22
APOA4P06727 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
APOA4P06727 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC13.68□□□□□ -0.22
APOA4P06727 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
APOA4P06727 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOA4P06727 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOA4P06727 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC13.68□□□□□ -0.22
APOA4P06727 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOA4P06727 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOA4P06727 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOA4P06727 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
APOA4P06727 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOA4P06727 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOA4P06727 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
APOA4P06727 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOA4P06727 GDA-203ENST00000376986 1771 ntTSL 2 BASIC13.68□□□□□ -0.22
APOA4P06727 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC13.68□□□□□ -0.22
APOA4P06727 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC13.68□□□□□ -0.22
APOA4P06727 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOA4P06727 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOA4P06727 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
APOA4P06727 RCC2P5-201ENST00000492126 1487 ntBASIC13.67□□□□□ -0.22
APOA4P06727 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
APOA4P06727 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
APOA4P06727 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOA4P06727 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOA4P06727 DDC-204ENST00000426377 1700 ntTSL 3 BASIC13.67□□□□□ -0.22
APOA4P06727 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOA4P06727 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOA4P06727 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOA4P06727 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOA4P06727 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOA4P06727 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
APOA4P06727 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOA4P06727 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
APOA4P06727 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOA4P06727 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC13.67□□□□□ -0.22
APOA4P06727 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
APOA4P06727 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
APOA4P06727 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOA4P06727 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC13.67□□□□□ -0.22
APOA4P06727 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
APOA4P06727 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOA4P06727 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC13.67□□□□□ -0.22
APOA4P06727 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC13.67□□□□□ -0.22
APOA4P06727 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOA4P06727 AL627231.1-201ENST00000394467 1125 ntBASIC13.67□□□□□ -0.22
APOA4P06727 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
APOA4P06727 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC13.67□□□□□ -0.22
APOA4P06727 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
APOA4P06727 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC13.67□□□□□ -0.22
APOA4P06727 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC13.67□□□□□ -0.22
APOA4P06727 GRPEL2P1-201ENST00000453145 339 ntBASIC13.67□□□□□ -0.22
APOA4P06727 CEP164P1-201ENST00000455142 418 ntBASIC13.67□□□□□ -0.22
APOA4P06727 UPF3AP2-201ENST00000457924 1132 ntBASIC13.67□□□□□ -0.22
APOA4P06727 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC13.67□□□□□ -0.22
APOA4P06727 TPM1-223ENST00000560445 485 ntTSL 3 BASIC13.67□□□□□ -0.22
APOA4P06727 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.67□□□□□ -0.22
APOA4P06727 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.67□□□□□ -0.22
APOA4P06727 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC13.67□□□□□ -0.22
APOA4P06727 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC13.67□□□□□ -0.22
APOA4P06727 AL021578.1-201ENST00000613646 709 ntBASIC13.67□□□□□ -0.22
APOA4P06727 HPX-213ENST00000615166 826 ntTSL 5 BASIC13.67□□□□□ -0.22
APOA4P06727 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOA4P06727 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOA4P06727 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.67□□□□□ -0.22
APOA4P06727 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
APOA4P06727 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOA4P06727 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC13.67□□□□□ -0.22
APOA4P06727 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC13.67□□□□□ -0.22
APOA4P06727 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOA4P06727 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOA4P06727 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOA4P06727 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
APOA4P06727 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOA4P06727 AC090114.2-201ENST00000608477 7054 ntBASIC13.67□□□□□ -0.22
APOA4P06727 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC13.67□□□□□ -0.22
APOA4P06727 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.67□□□□□ -0.22
APOA4P06727 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOA4P06727 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOA4P06727 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC13.67□□□□□ -0.22
APOA4P06727 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
APOA4P06727 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA4P06727 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.66□□□□□ -0.22
APOA4P06727 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
APOA4P06727 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOA4P06727 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOA4P06727 AC040160.2-201ENST00000623816 1675 ntBASIC13.66□□□□□ -0.22
APOA4P06727 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA4P06727 LINC00563-201ENST00000566370 1400 ntBASIC13.66□□□□□ -0.22
APOA4P06727 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOA4P06727 AL118506.1-201ENST00000601296 3082 ntBASIC13.66□□□□□ -0.22
APOA4P06727 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
APOA4P06727 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
APOA4P06727 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA4P06727 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms