Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 FAM86B3P-203ENST00000523992 854 ntBASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 BAK1P2-201ENST00000532665 631 ntBASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 AC005357.2-202ENST00000590507 1060 ntBASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 SNORA50.1-201ENST00000628590 135 ntBASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 AC020917.4-201ENST00000623994 1999 ntBASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 AL672207.1-201ENST00000328462 1570 ntBASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 CR383656.2-201ENST00000548656 2254 ntBASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 AP000244.1-201ENST00000424582 201 ntBASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 KRT18P46-201ENST00000435568 1279 ntBASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 ASS1P2-201ENST00000439895 1223 ntBASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 GALP-202ENST00000440823 889 ntTSL 5 BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 AL135901.1-201ENST00000451812 333 ntBASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 AC010234.1-201ENST00000494599 870 ntBASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 DLK1-205ENST00000556051 469 ntTSL 2 BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 HKR1-225ENST00000592168 566 ntTSL 4 BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 AC005014.1-201ENST00000432006 2976 ntBASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPA3F8WFD2 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPA3F8WFD2 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms