Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
DDX49Q9Y6V7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
DDX49Q9Y6V7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC26.52■■□□□ 1.84
DDX49Q9Y6V7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.52■■□□□ 1.84
DDX49Q9Y6V7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
DDX49Q9Y6V7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
DDX49Q9Y6V7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
DDX49Q9Y6V7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
DDX49Q9Y6V7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
DDX49Q9Y6V7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC26.51■■□□□ 1.83
DDX49Q9Y6V7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC26.51■■□□□ 1.83
DDX49Q9Y6V7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
DDX49Q9Y6V7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
DDX49Q9Y6V7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
DDX49Q9Y6V7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
DDX49Q9Y6V7 GUSBP5-202ENST00000510805 1989 ntBASIC26.5■■□□□ 1.83
DDX49Q9Y6V7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC26.5■■□□□ 1.83
DDX49Q9Y6V7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
DDX49Q9Y6V7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC26.5■■□□□ 1.83
DDX49Q9Y6V7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC26.5■■□□□ 1.83
DDX49Q9Y6V7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
DDX49Q9Y6V7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
DDX49Q9Y6V7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
DDX49Q9Y6V7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
DDX49Q9Y6V7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC26.49■■□□□ 1.83
DDX49Q9Y6V7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
DDX49Q9Y6V7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
DDX49Q9Y6V7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC26.49■■□□□ 1.83
DDX49Q9Y6V7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC26.49■■□□□ 1.83
DDX49Q9Y6V7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC26.48■■□□□ 1.83
DDX49Q9Y6V7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
DDX49Q9Y6V7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.48■■□□□ 1.83
DDX49Q9Y6V7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
DDX49Q9Y6V7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
DDX49Q9Y6V7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.48■■□□□ 1.83
DDX49Q9Y6V7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.48■■□□□ 1.83
DDX49Q9Y6V7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
DDX49Q9Y6V7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
DDX49Q9Y6V7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
DDX49Q9Y6V7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
DDX49Q9Y6V7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC26.48■■□□□ 1.83
DDX49Q9Y6V7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
DDX49Q9Y6V7 AC092068.2-201ENST00000590491 1708 ntBASIC26.48■■□□□ 1.83
DDX49Q9Y6V7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
DDX49Q9Y6V7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
DDX49Q9Y6V7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
DDX49Q9Y6V7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
DDX49Q9Y6V7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.47■■□□□ 1.83
DDX49Q9Y6V7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC26.47■■□□□ 1.83
DDX49Q9Y6V7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
DDX49Q9Y6V7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.47■■□□□ 1.83
DDX49Q9Y6V7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
DDX49Q9Y6V7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC26.47■■□□□ 1.83
DDX49Q9Y6V7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
DDX49Q9Y6V7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
DDX49Q9Y6V7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
DDX49Q9Y6V7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
DDX49Q9Y6V7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC26.46■■□□□ 1.83
DDX49Q9Y6V7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
DDX49Q9Y6V7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC26.46■■□□□ 1.83
DDX49Q9Y6V7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC26.46■■□□□ 1.83
DDX49Q9Y6V7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
DDX49Q9Y6V7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
DDX49Q9Y6V7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
DDX49Q9Y6V7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
DDX49Q9Y6V7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
DDX49Q9Y6V7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC26.45■■□□□ 1.82
DDX49Q9Y6V7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC26.45■■□□□ 1.82
DDX49Q9Y6V7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.45■■□□□ 1.82
DDX49Q9Y6V7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.45■■□□□ 1.82
DDX49Q9Y6V7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
DDX49Q9Y6V7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
DDX49Q9Y6V7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
DDX49Q9Y6V7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
DDX49Q9Y6V7 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.44■■□□□ 1.82
DDX49Q9Y6V7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
DDX49Q9Y6V7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
DDX49Q9Y6V7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
DDX49Q9Y6V7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
DDX49Q9Y6V7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC26.44■■□□□ 1.82
DDX49Q9Y6V7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
DDX49Q9Y6V7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
DDX49Q9Y6V7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
DDX49Q9Y6V7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
DDX49Q9Y6V7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
DDX49Q9Y6V7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
DDX49Q9Y6V7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
DDX49Q9Y6V7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
DDX49Q9Y6V7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC26.43■■□□□ 1.82
DDX49Q9Y6V7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC26.43■■□□□ 1.82
DDX49Q9Y6V7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
DDX49Q9Y6V7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC26.43■■□□□ 1.82
DDX49Q9Y6V7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
DDX49Q9Y6V7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC26.42■■□□□ 1.82
DDX49Q9Y6V7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
DDX49Q9Y6V7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC26.42■■□□□ 1.82
DDX49Q9Y6V7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC26.42■■□□□ 1.82
DDX49Q9Y6V7 AC127496.7-201ENST00000625110 1798 ntBASIC26.42■■□□□ 1.82
DDX49Q9Y6V7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
DDX49Q9Y6V7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms