Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HRH3Q9Y5N1 AC026271.2-201ENST00000428091 497 ntBASIC20.47■□□□□ 0.87
HRH3Q9Y5N1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HRH3Q9Y5N1 RARRES2P6-201ENST00000567333 442 ntBASIC20.47■□□□□ 0.87
HRH3Q9Y5N1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
HRH3Q9Y5N1 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.47■□□□□ 0.87
HRH3Q9Y5N1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.47■□□□□ 0.87
HRH3Q9Y5N1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HRH3Q9Y5N1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
HRH3Q9Y5N1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HRH3Q9Y5N1 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HRH3Q9Y5N1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HRH3Q9Y5N1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.46■□□□□ 0.87
HRH3Q9Y5N1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HRH3Q9Y5N1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HRH3Q9Y5N1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HRH3Q9Y5N1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
HRH3Q9Y5N1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HRH3Q9Y5N1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HRH3Q9Y5N1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HRH3Q9Y5N1 AF213884.3-201ENST00000563833 479 ntBASIC20.46■□□□□ 0.87
HRH3Q9Y5N1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.46■□□□□ 0.87
HRH3Q9Y5N1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HRH3Q9Y5N1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
HRH3Q9Y5N1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
HRH3Q9Y5N1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
HRH3Q9Y5N1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.87
HRH3Q9Y5N1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HRH3Q9Y5N1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.45■□□□□ 0.86
HRH3Q9Y5N1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HRH3Q9Y5N1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HRH3Q9Y5N1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
HRH3Q9Y5N1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
HRH3Q9Y5N1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.45■□□□□ 0.86
HRH3Q9Y5N1 SERBP1P1-201ENST00000396021 1160 ntBASIC20.45■□□□□ 0.86
HRH3Q9Y5N1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
HRH3Q9Y5N1 DUX4L19-201ENST00000557448 1267 ntBASIC20.45■□□□□ 0.86
HRH3Q9Y5N1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HRH3Q9Y5N1 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.45■□□□□ 0.86
HRH3Q9Y5N1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
HRH3Q9Y5N1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
HRH3Q9Y5N1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.45■□□□□ 0.86
HRH3Q9Y5N1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HRH3Q9Y5N1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HRH3Q9Y5N1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HRH3Q9Y5N1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HRH3Q9Y5N1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.44■□□□□ 0.86
HRH3Q9Y5N1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.44■□□□□ 0.86
HRH3Q9Y5N1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HRH3Q9Y5N1 SYT6-210ENST00000641643 1587 ntBASIC20.44■□□□□ 0.86
HRH3Q9Y5N1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HRH3Q9Y5N1 MIR939-201ENST00000401314 82 ntBASIC20.44■□□□□ 0.86
HRH3Q9Y5N1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HRH3Q9Y5N1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.44■□□□□ 0.86
HRH3Q9Y5N1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HRH3Q9Y5N1 ANOS2P-203ENST00000472227 1816 ntBASIC20.43■□□□□ 0.86
HRH3Q9Y5N1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
HRH3Q9Y5N1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HRH3Q9Y5N1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
HRH3Q9Y5N1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HRH3Q9Y5N1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
HRH3Q9Y5N1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
HRH3Q9Y5N1 AC105265.2-201ENST00000467189 838 ntBASIC20.43■□□□□ 0.86
HRH3Q9Y5N1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.43■□□□□ 0.86
HRH3Q9Y5N1 AP001330.3-201ENST00000520123 633 ntBASIC20.43■□□□□ 0.86
HRH3Q9Y5N1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.43■□□□□ 0.86
HRH3Q9Y5N1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.43■□□□□ 0.86
HRH3Q9Y5N1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.43■□□□□ 0.86
HRH3Q9Y5N1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HRH3Q9Y5N1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.42■□□□□ 0.86
HRH3Q9Y5N1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HRH3Q9Y5N1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HRH3Q9Y5N1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HRH3Q9Y5N1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.42■□□□□ 0.86
HRH3Q9Y5N1 MIR4767-201ENST00000582827 78 ntBASIC20.42■□□□□ 0.86
HRH3Q9Y5N1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
HRH3Q9Y5N1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HRH3Q9Y5N1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HRH3Q9Y5N1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HRH3Q9Y5N1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HRH3Q9Y5N1 AC079834.2-201ENST00000609776 1949 ntBASIC20.41■□□□□ 0.86
HRH3Q9Y5N1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HRH3Q9Y5N1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.41■□□□□ 0.86
HRH3Q9Y5N1 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.41■□□□□ 0.86
HRH3Q9Y5N1 AC009086.3-201ENST00000623486 1008 ntBASIC20.41■□□□□ 0.86
HRH3Q9Y5N1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
HRH3Q9Y5N1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HRH3Q9Y5N1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HRH3Q9Y5N1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
HRH3Q9Y5N1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.41■□□□□ 0.86
HRH3Q9Y5N1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HRH3Q9Y5N1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
HRH3Q9Y5N1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
HRH3Q9Y5N1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.4■□□□□ 0.86
HRH3Q9Y5N1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HRH3Q9Y5N1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.4■□□□□ 0.86
HRH3Q9Y5N1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
HRH3Q9Y5N1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.4■□□□□ 0.86
HRH3Q9Y5N1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
HRH3Q9Y5N1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms