Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDHB9Q9Y5E1 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB9Q9Y5E1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
PCDHB9Q9Y5E1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB9Q9Y5E1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB9Q9Y5E1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDHB9Q9Y5E1 IRS3P-201ENST00000223076 1006 ntBASIC22.55■■□□□ 1.2
PCDHB9Q9Y5E1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
PCDHB9Q9Y5E1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB9Q9Y5E1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB9Q9Y5E1 AC027682.1-201ENST00000562846 899 ntBASIC22.55■■□□□ 1.2
PCDHB9Q9Y5E1 AC009086.3-201ENST00000623486 1008 ntBASIC22.55■■□□□ 1.2
PCDHB9Q9Y5E1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
PCDHB9Q9Y5E1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
PCDHB9Q9Y5E1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB9Q9Y5E1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB9Q9Y5E1 LINC01529-204ENST00000636474 1715 ntBASIC22.54■■□□□ 1.2
PCDHB9Q9Y5E1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB9Q9Y5E1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB9Q9Y5E1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.54■■□□□ 1.2
PCDHB9Q9Y5E1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB9Q9Y5E1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB9Q9Y5E1 AC006455.2-201ENST00000429931 906 ntBASIC22.54■■□□□ 1.2
PCDHB9Q9Y5E1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB9Q9Y5E1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
PCDHB9Q9Y5E1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB9Q9Y5E1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
PCDHB9Q9Y5E1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB9Q9Y5E1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHB9Q9Y5E1 AC092068.2-201ENST00000590491 1708 ntBASIC22.54■■□□□ 1.2
PCDHB9Q9Y5E1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB9Q9Y5E1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB9Q9Y5E1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB9Q9Y5E1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB9Q9Y5E1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB9Q9Y5E1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
PCDHB9Q9Y5E1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PCDHB9Q9Y5E1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.53■■□□□ 1.2
PCDHB9Q9Y5E1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHB9Q9Y5E1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB9Q9Y5E1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB9Q9Y5E1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB9Q9Y5E1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB9Q9Y5E1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB9Q9Y5E1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHB9Q9Y5E1 AL353803.4-201ENST00000565882 1934 ntBASIC22.53■■□□□ 1.2
PCDHB9Q9Y5E1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB9Q9Y5E1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB9Q9Y5E1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB9Q9Y5E1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB9Q9Y5E1 AC008764.7-201ENST00000593779 1081 ntBASIC22.52■■□□□ 1.2
PCDHB9Q9Y5E1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDHB9Q9Y5E1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
PCDHB9Q9Y5E1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDHB9Q9Y5E1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDHB9Q9Y5E1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB9Q9Y5E1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB9Q9Y5E1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB9Q9Y5E1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB9Q9Y5E1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
PCDHB9Q9Y5E1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.51■■□□□ 1.19
PCDHB9Q9Y5E1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB9Q9Y5E1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB9Q9Y5E1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.51■■□□□ 1.19
PCDHB9Q9Y5E1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB9Q9Y5E1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB9Q9Y5E1 DUX4L4-201ENST00000566884 1269 ntBASIC22.51■■□□□ 1.19
PCDHB9Q9Y5E1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB9Q9Y5E1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.5■■□□□ 1.19
PCDHB9Q9Y5E1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
PCDHB9Q9Y5E1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB9Q9Y5E1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.5■■□□□ 1.19
PCDHB9Q9Y5E1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHB9Q9Y5E1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.5■■□□□ 1.19
PCDHB9Q9Y5E1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
PCDHB9Q9Y5E1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB9Q9Y5E1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
PCDHB9Q9Y5E1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB9Q9Y5E1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB9Q9Y5E1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDHB9Q9Y5E1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB9Q9Y5E1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDHB9Q9Y5E1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
PCDHB9Q9Y5E1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDHB9Q9Y5E1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PCDHB9Q9Y5E1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB9Q9Y5E1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB9Q9Y5E1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB9Q9Y5E1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
PCDHB9Q9Y5E1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB9Q9Y5E1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDHB9Q9Y5E1 SERBP1P1-201ENST00000396021 1160 ntBASIC22.48■■□□□ 1.19
PCDHB9Q9Y5E1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB9Q9Y5E1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.48■■□□□ 1.19
PCDHB9Q9Y5E1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDHB9Q9Y5E1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB9Q9Y5E1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.48■■□□□ 1.19
PCDHB9Q9Y5E1 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB9Q9Y5E1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.48■■□□□ 1.19
PCDHB9Q9Y5E1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms