Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
LRFN1Q9P244 TSPY26P-201ENST00000476365 1326 ntBASIC20.41■□□□□ 0.86
LRFN1Q9P244 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.41■□□□□ 0.86
LRFN1Q9P244 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRFN1Q9P244 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.41■□□□□ 0.86
LRFN1Q9P244 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRFN1Q9P244 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRFN1Q9P244 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
LRFN1Q9P244 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
LRFN1Q9P244 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRFN1Q9P244 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRFN1Q9P244 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
LRFN1Q9P244 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LRFN1Q9P244 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRFN1Q9P244 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.39■□□□□ 0.85
LRFN1Q9P244 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRFN1Q9P244 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
LRFN1Q9P244 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRFN1Q9P244 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
LRFN1Q9P244 OR2I1P-207ENST00000453522 948 ntBASIC20.39■□□□□ 0.85
LRFN1Q9P244 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
LRFN1Q9P244 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.39■□□□□ 0.85
LRFN1Q9P244 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRFN1Q9P244 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRFN1Q9P244 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
LRFN1Q9P244 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRFN1Q9P244 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRFN1Q9P244 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRFN1Q9P244 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.38■□□□□ 0.85
LRFN1Q9P244 MIR6821-201ENST00000617625 74 ntBASIC20.38■□□□□ 0.85
LRFN1Q9P244 AC079630.1-202ENST00000618127 1840 ntBASIC20.38■□□□□ 0.85
LRFN1Q9P244 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.38■□□□□ 0.85
LRFN1Q9P244 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRFN1Q9P244 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRFN1Q9P244 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRFN1Q9P244 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.37■□□□□ 0.85
LRFN1Q9P244 AC097381.1-201ENST00000429019 1296 ntBASIC20.37■□□□□ 0.85
LRFN1Q9P244 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.37■□□□□ 0.85
LRFN1Q9P244 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.37■□□□□ 0.85
LRFN1Q9P244 AC010525.1-201ENST00000585559 441 ntBASIC20.37■□□□□ 0.85
LRFN1Q9P244 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
LRFN1Q9P244 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRFN1Q9P244 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRFN1Q9P244 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRFN1Q9P244 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
LRFN1Q9P244 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRFN1Q9P244 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.36■□□□□ 0.85
LRFN1Q9P244 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRFN1Q9P244 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRFN1Q9P244 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.36■□□□□ 0.85
LRFN1Q9P244 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.36■□□□□ 0.85
LRFN1Q9P244 IGHV3-19-201ENST00000521488 291 ntBASIC20.36■□□□□ 0.85
LRFN1Q9P244 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRFN1Q9P244 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.36■□□□□ 0.85
LRFN1Q9P244 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRFN1Q9P244 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.36■□□□□ 0.85
LRFN1Q9P244 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
LRFN1Q9P244 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRFN1Q9P244 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.35■□□□□ 0.85
LRFN1Q9P244 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRFN1Q9P244 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.35■□□□□ 0.85
LRFN1Q9P244 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRFN1Q9P244 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.35■□□□□ 0.85
LRFN1Q9P244 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.35■□□□□ 0.85
LRFN1Q9P244 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.35■□□□□ 0.85
LRFN1Q9P244 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.35■□□□□ 0.85
LRFN1Q9P244 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRFN1Q9P244 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.35■□□□□ 0.85
LRFN1Q9P244 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRFN1Q9P244 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
LRFN1Q9P244 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
LRFN1Q9P244 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRFN1Q9P244 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
LRFN1Q9P244 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
LRFN1Q9P244 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRFN1Q9P244 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LRFN1Q9P244 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.34■□□□□ 0.85
LRFN1Q9P244 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRFN1Q9P244 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LRFN1Q9P244 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRFN1Q9P244 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.34■□□□□ 0.85
LRFN1Q9P244 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.34■□□□□ 0.85
LRFN1Q9P244 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.34■□□□□ 0.85
LRFN1Q9P244 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LRFN1Q9P244 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LRFN1Q9P244 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRFN1Q9P244 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRFN1Q9P244 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LRFN1Q9P244 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
LRFN1Q9P244 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.33■□□□□ 0.85
LRFN1Q9P244 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.33■□□□□ 0.85
LRFN1Q9P244 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
LRFN1Q9P244 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
LRFN1Q9P244 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.33■□□□□ 0.85
LRFN1Q9P244 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LRFN1Q9P244 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRFN1Q9P244 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.33■□□□□ 0.84
LRFN1Q9P244 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRFN1Q9P244 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LRFN1Q9P244 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms