Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SMCO4Q9NRQ5 LINC00273-201ENST00000539813 1452 ntBASIC17.5■□□□□ 0.39
SMCO4Q9NRQ5 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.5■□□□□ 0.39
SMCO4Q9NRQ5 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
SMCO4Q9NRQ5 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SMCO4Q9NRQ5 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMCO4Q9NRQ5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMCO4Q9NRQ5 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMCO4Q9NRQ5 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.5■□□□□ 0.39
SMCO4Q9NRQ5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.5■□□□□ 0.39
SMCO4Q9NRQ5 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMCO4Q9NRQ5 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMCO4Q9NRQ5 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMCO4Q9NRQ5 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMCO4Q9NRQ5 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SMCO4Q9NRQ5 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMCO4Q9NRQ5 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMCO4Q9NRQ5 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.49■□□□□ 0.39
SMCO4Q9NRQ5 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMCO4Q9NRQ5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SMCO4Q9NRQ5 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMCO4Q9NRQ5 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.49■□□□□ 0.39
SMCO4Q9NRQ5 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMCO4Q9NRQ5 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC17.49■□□□□ 0.39
SMCO4Q9NRQ5 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.49■□□□□ 0.39
SMCO4Q9NRQ5 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMCO4Q9NRQ5 FAM99A-202ENST00000538190 1989 ntBASIC17.49■□□□□ 0.39
SMCO4Q9NRQ5 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SMCO4Q9NRQ5 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SMCO4Q9NRQ5 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.49■□□□□ 0.39
SMCO4Q9NRQ5 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMCO4Q9NRQ5 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMCO4Q9NRQ5 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMCO4Q9NRQ5 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMCO4Q9NRQ5 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMCO4Q9NRQ5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
SMCO4Q9NRQ5 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMCO4Q9NRQ5 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SMCO4Q9NRQ5 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SMCO4Q9NRQ5 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMCO4Q9NRQ5 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SMCO4Q9NRQ5 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMCO4Q9NRQ5 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMCO4Q9NRQ5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SMCO4Q9NRQ5 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
SMCO4Q9NRQ5 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMCO4Q9NRQ5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMCO4Q9NRQ5 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMCO4Q9NRQ5 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMCO4Q9NRQ5 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC17.47■□□□□ 0.39
SMCO4Q9NRQ5 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SMCO4Q9NRQ5 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC17.47■□□□□ 0.39
SMCO4Q9NRQ5 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMCO4Q9NRQ5 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMCO4Q9NRQ5 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.47■□□□□ 0.39
SMCO4Q9NRQ5 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SMCO4Q9NRQ5 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.47■□□□□ 0.39
SMCO4Q9NRQ5 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMCO4Q9NRQ5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SMCO4Q9NRQ5 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
SMCO4Q9NRQ5 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMCO4Q9NRQ5 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMCO4Q9NRQ5 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMCO4Q9NRQ5 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMCO4Q9NRQ5 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.46■□□□□ 0.39
SMCO4Q9NRQ5 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMCO4Q9NRQ5 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMCO4Q9NRQ5 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.46■□□□□ 0.39
SMCO4Q9NRQ5 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SMCO4Q9NRQ5 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.46■□□□□ 0.39
SMCO4Q9NRQ5 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMCO4Q9NRQ5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMCO4Q9NRQ5 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMCO4Q9NRQ5 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMCO4Q9NRQ5 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMCO4Q9NRQ5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.46■□□□□ 0.39
SMCO4Q9NRQ5 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.46■□□□□ 0.39
SMCO4Q9NRQ5 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SMCO4Q9NRQ5 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMCO4Q9NRQ5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SMCO4Q9NRQ5 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.45■□□□□ 0.38
SMCO4Q9NRQ5 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMCO4Q9NRQ5 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SMCO4Q9NRQ5 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.45■□□□□ 0.38
SMCO4Q9NRQ5 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMCO4Q9NRQ5 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMCO4Q9NRQ5 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMCO4Q9NRQ5 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
SMCO4Q9NRQ5 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMCO4Q9NRQ5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.44■□□□□ 0.38
SMCO4Q9NRQ5 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMCO4Q9NRQ5 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SMCO4Q9NRQ5 PEX7-203ENST00000541292 945 ntTSL 5 BASIC17.44■□□□□ 0.38
SMCO4Q9NRQ5 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SMCO4Q9NRQ5 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMCO4Q9NRQ5 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMCO4Q9NRQ5 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.44■□□□□ 0.38
SMCO4Q9NRQ5 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.44■□□□□ 0.38
SMCO4Q9NRQ5 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMCO4Q9NRQ5 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms