Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
C12orf4Q9NQ89 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C12orf4Q9NQ89 AC137767.1-201ENST00000602918 1920 ntBASIC19.15■□□□□ 0.66
C12orf4Q9NQ89 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
C12orf4Q9NQ89 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.15■□□□□ 0.66
C12orf4Q9NQ89 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C12orf4Q9NQ89 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
C12orf4Q9NQ89 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C12orf4Q9NQ89 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.15■□□□□ 0.66
C12orf4Q9NQ89 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
C12orf4Q9NQ89 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
C12orf4Q9NQ89 LONRF2P2-201ENST00000439212 571 ntBASIC19.15■□□□□ 0.66
C12orf4Q9NQ89 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.15■□□□□ 0.66
C12orf4Q9NQ89 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.15■□□□□ 0.66
C12orf4Q9NQ89 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C12orf4Q9NQ89 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
C12orf4Q9NQ89 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C12orf4Q9NQ89 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
C12orf4Q9NQ89 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
C12orf4Q9NQ89 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
C12orf4Q9NQ89 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
C12orf4Q9NQ89 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
C12orf4Q9NQ89 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.14■□□□□ 0.65
C12orf4Q9NQ89 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.14■□□□□ 0.65
C12orf4Q9NQ89 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
C12orf4Q9NQ89 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
C12orf4Q9NQ89 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
C12orf4Q9NQ89 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.13■□□□□ 0.65
C12orf4Q9NQ89 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.13■□□□□ 0.65
C12orf4Q9NQ89 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
C12orf4Q9NQ89 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.13■□□□□ 0.65
C12orf4Q9NQ89 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
C12orf4Q9NQ89 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
C12orf4Q9NQ89 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
C12orf4Q9NQ89 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
C12orf4Q9NQ89 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
C12orf4Q9NQ89 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
C12orf4Q9NQ89 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
C12orf4Q9NQ89 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
C12orf4Q9NQ89 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
C12orf4Q9NQ89 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
C12orf4Q9NQ89 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.13■□□□□ 0.65
C12orf4Q9NQ89 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.12■□□□□ 0.65
C12orf4Q9NQ89 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
C12orf4Q9NQ89 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.12■□□□□ 0.65
C12orf4Q9NQ89 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
C12orf4Q9NQ89 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C12orf4Q9NQ89 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C12orf4Q9NQ89 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.12■□□□□ 0.65
C12orf4Q9NQ89 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C12orf4Q9NQ89 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
C12orf4Q9NQ89 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.12■□□□□ 0.65
C12orf4Q9NQ89 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
C12orf4Q9NQ89 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.12■□□□□ 0.65
C12orf4Q9NQ89 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C12orf4Q9NQ89 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C12orf4Q9NQ89 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
C12orf4Q9NQ89 RARRES2P2-201ENST00000394842 485 ntBASIC19.11■□□□□ 0.65
C12orf4Q9NQ89 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
C12orf4Q9NQ89 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.11■□□□□ 0.65
C12orf4Q9NQ89 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C12orf4Q9NQ89 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C12orf4Q9NQ89 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C12orf4Q9NQ89 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
C12orf4Q9NQ89 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
C12orf4Q9NQ89 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
C12orf4Q9NQ89 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
C12orf4Q9NQ89 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
C12orf4Q9NQ89 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
C12orf4Q9NQ89 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
C12orf4Q9NQ89 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
C12orf4Q9NQ89 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
C12orf4Q9NQ89 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
C12orf4Q9NQ89 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.1■□□□□ 0.65
C12orf4Q9NQ89 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
C12orf4Q9NQ89 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.1■□□□□ 0.65
C12orf4Q9NQ89 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
C12orf4Q9NQ89 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.1■□□□□ 0.65
C12orf4Q9NQ89 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.1■□□□□ 0.65
C12orf4Q9NQ89 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
C12orf4Q9NQ89 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
C12orf4Q9NQ89 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.1■□□□□ 0.65
C12orf4Q9NQ89 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
C12orf4Q9NQ89 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
C12orf4Q9NQ89 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.09■□□□□ 0.65
C12orf4Q9NQ89 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
C12orf4Q9NQ89 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
C12orf4Q9NQ89 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
C12orf4Q9NQ89 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
C12orf4Q9NQ89 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
C12orf4Q9NQ89 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.09■□□□□ 0.65
C12orf4Q9NQ89 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
C12orf4Q9NQ89 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
C12orf4Q9NQ89 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
C12orf4Q9NQ89 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.09■□□□□ 0.65
C12orf4Q9NQ89 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
C12orf4Q9NQ89 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
C12orf4Q9NQ89 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.08■□□□□ 0.65
C12orf4Q9NQ89 ALDH1A3-203ENST00000557963 1670 ntBASIC19.08■□□□□ 0.65
C12orf4Q9NQ89 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms