Protein–RNA interactions for Protein: Q9H8M7

MINDY3, Ubiquitin carboxyl-terminal hydrolase MINDY-3, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3Q9H8M7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
MINDY3Q9H8M7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
MINDY3Q9H8M7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
MINDY3Q9H8M7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC24.39■■□□□ 1.49
MINDY3Q9H8M7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
MINDY3Q9H8M7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
MINDY3Q9H8M7 IRS3P-201ENST00000223076 1006 ntBASIC24.38■■□□□ 1.49
MINDY3Q9H8M7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
MINDY3Q9H8M7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
MINDY3Q9H8M7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC24.38■■□□□ 1.49
MINDY3Q9H8M7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
MINDY3Q9H8M7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
MINDY3Q9H8M7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
MINDY3Q9H8M7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
MINDY3Q9H8M7 OR2I1P-207ENST00000453522 948 ntBASIC24.37■■□□□ 1.49
MINDY3Q9H8M7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
MINDY3Q9H8M7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC24.37■■□□□ 1.49
MINDY3Q9H8M7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
MINDY3Q9H8M7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
MINDY3Q9H8M7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
MINDY3Q9H8M7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
MINDY3Q9H8M7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.36■■□□□ 1.49
MINDY3Q9H8M7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
MINDY3Q9H8M7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
MINDY3Q9H8M7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.36■■□□□ 1.49
MINDY3Q9H8M7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
MINDY3Q9H8M7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
MINDY3Q9H8M7 TSPY26P-201ENST00000476365 1326 ntBASIC24.35■■□□□ 1.49
MINDY3Q9H8M7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
MINDY3Q9H8M7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
MINDY3Q9H8M7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
MINDY3Q9H8M7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
MINDY3Q9H8M7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
MINDY3Q9H8M7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC24.35■■□□□ 1.49
MINDY3Q9H8M7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.35■■□□□ 1.49
MINDY3Q9H8M7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.35■■□□□ 1.49
MINDY3Q9H8M7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC24.35■■□□□ 1.49
MINDY3Q9H8M7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
MINDY3Q9H8M7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC24.34■■□□□ 1.49
MINDY3Q9H8M7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC24.34■■□□□ 1.49
MINDY3Q9H8M7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.34■■□□□ 1.49
MINDY3Q9H8M7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC24.34■■□□□ 1.49
MINDY3Q9H8M7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
MINDY3Q9H8M7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
MINDY3Q9H8M7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
MINDY3Q9H8M7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
MINDY3Q9H8M7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
MINDY3Q9H8M7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC24.33■■□□□ 1.49
MINDY3Q9H8M7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
MINDY3Q9H8M7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
MINDY3Q9H8M7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
MINDY3Q9H8M7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
MINDY3Q9H8M7 AC093323.1-202ENST00000635031 2045 ntBASIC24.33■■□□□ 1.49
MINDY3Q9H8M7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
MINDY3Q9H8M7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.48
MINDY3Q9H8M7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
MINDY3Q9H8M7 AC004687.1-201ENST00000579003 1625 ntBASIC24.32■■□□□ 1.48
MINDY3Q9H8M7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
MINDY3Q9H8M7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.32■■□□□ 1.48
MINDY3Q9H8M7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.32■■□□□ 1.48
MINDY3Q9H8M7 ANOS2P-203ENST00000472227 1816 ntBASIC24.32■■□□□ 1.48
MINDY3Q9H8M7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.32■■□□□ 1.48
MINDY3Q9H8M7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
MINDY3Q9H8M7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
MINDY3Q9H8M7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
MINDY3Q9H8M7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
MINDY3Q9H8M7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC24.31■■□□□ 1.48
MINDY3Q9H8M7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
MINDY3Q9H8M7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
MINDY3Q9H8M7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
MINDY3Q9H8M7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
MINDY3Q9H8M7 IGHV3-19-201ENST00000521488 291 ntBASIC24.31■■□□□ 1.48
MINDY3Q9H8M7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
MINDY3Q9H8M7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC24.3■■□□□ 1.48
MINDY3Q9H8M7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.3■■□□□ 1.48
MINDY3Q9H8M7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.3■■□□□ 1.48
MINDY3Q9H8M7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
MINDY3Q9H8M7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
MINDY3Q9H8M7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
MINDY3Q9H8M7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
MINDY3Q9H8M7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
MINDY3Q9H8M7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
MINDY3Q9H8M7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
MINDY3Q9H8M7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
MINDY3Q9H8M7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
MINDY3Q9H8M7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
MINDY3Q9H8M7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC24.29■■□□□ 1.48
MINDY3Q9H8M7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
MINDY3Q9H8M7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
MINDY3Q9H8M7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.29■■□□□ 1.48
MINDY3Q9H8M7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
MINDY3Q9H8M7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.28■■□□□ 1.48
MINDY3Q9H8M7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
MINDY3Q9H8M7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
MINDY3Q9H8M7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
MINDY3Q9H8M7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
MINDY3Q9H8M7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.28■■□□□ 1.48
MINDY3Q9H8M7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.28■■□□□ 1.48
MINDY3Q9H8M7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.28■■□□□ 1.48
MINDY3Q9H8M7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms