Protein–RNA interactions for Protein: Q9H7M6

ZSWIM4, Zinc finger SWIM domain-containing protein 4, humanhuman

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM4Q9H7M6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ZSWIM4Q9H7M6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ZSWIM4Q9H7M6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
ZSWIM4Q9H7M6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
ZSWIM4Q9H7M6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
ZSWIM4Q9H7M6 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
ZSWIM4Q9H7M6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ZSWIM4Q9H7M6 DUSP8P5-201ENST00000422884 1815 ntBASIC25.09■■□□□ 1.61
ZSWIM4Q9H7M6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
ZSWIM4Q9H7M6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
ZSWIM4Q9H7M6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
ZSWIM4Q9H7M6 AC144652.1-201ENST00000609974 1624 ntBASIC25.09■■□□□ 1.61
ZSWIM4Q9H7M6 FP325331.1-202ENST00000623531 1380 ntBASIC25.09■■□□□ 1.61
ZSWIM4Q9H7M6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ZSWIM4Q9H7M6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ZSWIM4Q9H7M6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
ZSWIM4Q9H7M6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.09■■□□□ 1.61
ZSWIM4Q9H7M6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.09■■□□□ 1.61
ZSWIM4Q9H7M6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
ZSWIM4Q9H7M6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
ZSWIM4Q9H7M6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
ZSWIM4Q9H7M6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
ZSWIM4Q9H7M6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
ZSWIM4Q9H7M6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC25.08■■□□□ 1.61
ZSWIM4Q9H7M6 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
ZSWIM4Q9H7M6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
ZSWIM4Q9H7M6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
ZSWIM4Q9H7M6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
ZSWIM4Q9H7M6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
ZSWIM4Q9H7M6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.6
ZSWIM4Q9H7M6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ZSWIM4Q9H7M6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
ZSWIM4Q9H7M6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
ZSWIM4Q9H7M6 SYT6-210ENST00000641643 1587 ntBASIC25.07■■□□□ 1.6
ZSWIM4Q9H7M6 UNC93B3-201ENST00000308076 687 ntBASIC25.07■■□□□ 1.6
ZSWIM4Q9H7M6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ZSWIM4Q9H7M6 AL139246.5-201ENST00000606645 996 ntBASIC25.07■■□□□ 1.6
ZSWIM4Q9H7M6 AC110285.6-201ENST00000617652 491 ntBASIC25.07■■□□□ 1.6
ZSWIM4Q9H7M6 AC009086.3-201ENST00000623486 1008 ntBASIC25.07■■□□□ 1.6
ZSWIM4Q9H7M6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
ZSWIM4Q9H7M6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
ZSWIM4Q9H7M6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
ZSWIM4Q9H7M6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ZSWIM4Q9H7M6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
ZSWIM4Q9H7M6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ZSWIM4Q9H7M6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.06■■□□□ 1.6
ZSWIM4Q9H7M6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.06■■□□□ 1.6
ZSWIM4Q9H7M6 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.06■■□□□ 1.6
ZSWIM4Q9H7M6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ZSWIM4Q9H7M6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ZSWIM4Q9H7M6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
ZSWIM4Q9H7M6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
ZSWIM4Q9H7M6 AC006455.2-201ENST00000429931 906 ntBASIC25.05■■□□□ 1.6
ZSWIM4Q9H7M6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
ZSWIM4Q9H7M6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
ZSWIM4Q9H7M6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
ZSWIM4Q9H7M6 AC079630.1-202ENST00000618127 1840 ntBASIC25.05■■□□□ 1.6
ZSWIM4Q9H7M6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC25.04■■□□□ 1.6
ZSWIM4Q9H7M6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.04■■□□□ 1.6
ZSWIM4Q9H7M6 CLDN5-201ENST00000403084 2357 ntBASIC25.04■■□□□ 1.6
ZSWIM4Q9H7M6 H19-210ENST00000439725 1929 ntTSL 2 BASIC25.04■■□□□ 1.6
ZSWIM4Q9H7M6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ZSWIM4Q9H7M6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ZSWIM4Q9H7M6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.04■■□□□ 1.6
ZSWIM4Q9H7M6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
ZSWIM4Q9H7M6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ZSWIM4Q9H7M6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
ZSWIM4Q9H7M6 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ZSWIM4Q9H7M6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ZSWIM4Q9H7M6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ZSWIM4Q9H7M6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.03■■□□□ 1.6
ZSWIM4Q9H7M6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ZSWIM4Q9H7M6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC25.03■■□□□ 1.6
ZSWIM4Q9H7M6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ZSWIM4Q9H7M6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
ZSWIM4Q9H7M6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.03■■□□□ 1.6
ZSWIM4Q9H7M6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ZSWIM4Q9H7M6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.03■■□□□ 1.6
ZSWIM4Q9H7M6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
ZSWIM4Q9H7M6 DUX4L4-201ENST00000566884 1269 ntBASIC25.03■■□□□ 1.6
ZSWIM4Q9H7M6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ZSWIM4Q9H7M6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
ZSWIM4Q9H7M6 LINC01529-204ENST00000636474 1715 ntBASIC25.03■■□□□ 1.6
ZSWIM4Q9H7M6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.02■■□□□ 1.6
ZSWIM4Q9H7M6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
ZSWIM4Q9H7M6 SERBP1P1-201ENST00000396021 1160 ntBASIC25.02■■□□□ 1.6
ZSWIM4Q9H7M6 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ZSWIM4Q9H7M6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
ZSWIM4Q9H7M6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.02■■□□□ 1.6
ZSWIM4Q9H7M6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
ZSWIM4Q9H7M6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.02■■□□□ 1.6
ZSWIM4Q9H7M6 AL136162.1-201ENST00000607711 1078 ntBASIC25.02■■□□□ 1.6
ZSWIM4Q9H7M6 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.02■■□□□ 1.6
ZSWIM4Q9H7M6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ZSWIM4Q9H7M6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC25.02■■□□□ 1.6
ZSWIM4Q9H7M6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
ZSWIM4Q9H7M6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
ZSWIM4Q9H7M6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
ZSWIM4Q9H7M6 PTCHD3P2-201ENST00000424937 1205 ntBASIC25.01■■□□□ 1.59
ZSWIM4Q9H7M6 AL138724.1-201ENST00000606771 1088 ntBASIC25.01■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms