Protein–RNA interactions for Protein: Q9H741

C12orf49, UPF0454 protein C12orf49, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49Q9H741 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
C12orf49Q9H741 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
C12orf49Q9H741 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
C12orf49Q9H741 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
C12orf49Q9H741 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.71■□□□□ 0.75
C12orf49Q9H741 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.71■□□□□ 0.75
C12orf49Q9H741 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
C12orf49Q9H741 AL353803.4-201ENST00000565882 1934 ntBASIC19.71■□□□□ 0.75
C12orf49Q9H741 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.71■□□□□ 0.75
C12orf49Q9H741 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
C12orf49Q9H741 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
C12orf49Q9H741 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
C12orf49Q9H741 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
C12orf49Q9H741 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
C12orf49Q9H741 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
C12orf49Q9H741 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.71■□□□□ 0.75
C12orf49Q9H741 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
C12orf49Q9H741 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
C12orf49Q9H741 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
C12orf49Q9H741 AC099791.1-201ENST00000416440 715 ntBASIC19.7■□□□□ 0.74
C12orf49Q9H741 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
C12orf49Q9H741 AC027682.1-201ENST00000562846 899 ntBASIC19.7■□□□□ 0.74
C12orf49Q9H741 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
C12orf49Q9H741 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
C12orf49Q9H741 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
C12orf49Q9H741 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
C12orf49Q9H741 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
C12orf49Q9H741 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.69■□□□□ 0.74
C12orf49Q9H741 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.69■□□□□ 0.74
C12orf49Q9H741 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
C12orf49Q9H741 AC105265.2-201ENST00000467189 838 ntBASIC19.69■□□□□ 0.74
C12orf49Q9H741 AC091305.1-201ENST00000479476 895 ntBASIC19.69■□□□□ 0.74
C12orf49Q9H741 AL499627.2-201ENST00000606283 725 ntBASIC19.69■□□□□ 0.74
C12orf49Q9H741 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
C12orf49Q9H741 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
C12orf49Q9H741 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
C12orf49Q9H741 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
C12orf49Q9H741 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
C12orf49Q9H741 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
C12orf49Q9H741 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
C12orf49Q9H741 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
C12orf49Q9H741 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.68■□□□□ 0.74
C12orf49Q9H741 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.68■□□□□ 0.74
C12orf49Q9H741 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
C12orf49Q9H741 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
C12orf49Q9H741 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
C12orf49Q9H741 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.68■□□□□ 0.74
C12orf49Q9H741 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.68■□□□□ 0.74
C12orf49Q9H741 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
C12orf49Q9H741 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.68■□□□□ 0.74
C12orf49Q9H741 CA15P2-201ENST00000611168 834 ntBASIC19.68■□□□□ 0.74
C12orf49Q9H741 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
C12orf49Q9H741 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.68■□□□□ 0.74
C12orf49Q9H741 ANOS2P-203ENST00000472227 1816 ntBASIC19.67■□□□□ 0.74
C12orf49Q9H741 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
C12orf49Q9H741 MIR935-201ENST00000401179 91 ntBASIC19.67■□□□□ 0.74
C12orf49Q9H741 ZNRF2P3-201ENST00000424200 374 ntBASIC19.67■□□□□ 0.74
C12orf49Q9H741 SLC47A1P1-202ENST00000449666 945 ntBASIC19.67■□□□□ 0.74
C12orf49Q9H741 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.67■□□□□ 0.74
C12orf49Q9H741 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.67■□□□□ 0.74
C12orf49Q9H741 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.67■□□□□ 0.74
C12orf49Q9H741 AC233992.3-201ENST00000607491 485 ntBASIC19.67■□□□□ 0.74
C12orf49Q9H741 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.67■□□□□ 0.74
C12orf49Q9H741 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
C12orf49Q9H741 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
C12orf49Q9H741 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
C12orf49Q9H741 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
C12orf49Q9H741 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.67■□□□□ 0.74
C12orf49Q9H741 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
C12orf49Q9H741 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C12orf49Q9H741 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C12orf49Q9H741 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
C12orf49Q9H741 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C12orf49Q9H741 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C12orf49Q9H741 BX842568.3-201ENST00000418104 571 ntBASIC19.66■□□□□ 0.74
C12orf49Q9H741 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.66■□□□□ 0.74
C12orf49Q9H741 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
C12orf49Q9H741 RASA4CP-201ENST00000424092 1398 ntBASIC19.66■□□□□ 0.74
C12orf49Q9H741 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
C12orf49Q9H741 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
C12orf49Q9H741 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
C12orf49Q9H741 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.65■□□□□ 0.74
C12orf49Q9H741 AC126544.1-201ENST00000580842 1059 ntBASIC19.65■□□□□ 0.74
C12orf49Q9H741 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.65■□□□□ 0.74
C12orf49Q9H741 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
C12orf49Q9H741 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
C12orf49Q9H741 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
C12orf49Q9H741 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
C12orf49Q9H741 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
C12orf49Q9H741 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
C12orf49Q9H741 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.65■□□□□ 0.74
C12orf49Q9H741 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
C12orf49Q9H741 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
C12orf49Q9H741 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
C12orf49Q9H741 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
C12orf49Q9H741 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.64■□□□□ 0.73
C12orf49Q9H741 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
C12orf49Q9H741 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.64■□□□□ 0.73
C12orf49Q9H741 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
C12orf49Q9H741 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms