Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
NUCKS1Q9H1E3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.07■■□□□ 1.44
NUCKS1Q9H1E3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC24.07■■□□□ 1.44
NUCKS1Q9H1E3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
NUCKS1Q9H1E3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC24.07■■□□□ 1.44
NUCKS1Q9H1E3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC24.06■■□□□ 1.44
NUCKS1Q9H1E3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
NUCKS1Q9H1E3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NUCKS1Q9H1E3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
NUCKS1Q9H1E3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NUCKS1Q9H1E3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
NUCKS1Q9H1E3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.06■■□□□ 1.44
NUCKS1Q9H1E3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NUCKS1Q9H1E3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
NUCKS1Q9H1E3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC24.06■■□□□ 1.44
NUCKS1Q9H1E3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NUCKS1Q9H1E3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NUCKS1Q9H1E3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NUCKS1Q9H1E3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.05■■□□□ 1.44
NUCKS1Q9H1E3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
NUCKS1Q9H1E3 LINC00565-201ENST00000562710 2331 ntBASIC24.05■■□□□ 1.44
NUCKS1Q9H1E3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NUCKS1Q9H1E3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NUCKS1Q9H1E3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NUCKS1Q9H1E3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
NUCKS1Q9H1E3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
NUCKS1Q9H1E3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
NUCKS1Q9H1E3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NUCKS1Q9H1E3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NUCKS1Q9H1E3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NUCKS1Q9H1E3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NUCKS1Q9H1E3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
NUCKS1Q9H1E3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
NUCKS1Q9H1E3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.04■■□□□ 1.44
NUCKS1Q9H1E3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.04■■□□□ 1.44
NUCKS1Q9H1E3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NUCKS1Q9H1E3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.04■■□□□ 1.44
NUCKS1Q9H1E3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
NUCKS1Q9H1E3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
NUCKS1Q9H1E3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
NUCKS1Q9H1E3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
NUCKS1Q9H1E3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
NUCKS1Q9H1E3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NUCKS1Q9H1E3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.03■■□□□ 1.44
NUCKS1Q9H1E3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
NUCKS1Q9H1E3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.03■■□□□ 1.44
NUCKS1Q9H1E3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
NUCKS1Q9H1E3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
NUCKS1Q9H1E3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NUCKS1Q9H1E3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
NUCKS1Q9H1E3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC24.02■■□□□ 1.44
NUCKS1Q9H1E3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
NUCKS1Q9H1E3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.02■■□□□ 1.44
NUCKS1Q9H1E3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
NUCKS1Q9H1E3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.02■■□□□ 1.44
NUCKS1Q9H1E3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.02■■□□□ 1.44
NUCKS1Q9H1E3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
NUCKS1Q9H1E3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
NUCKS1Q9H1E3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
NUCKS1Q9H1E3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NUCKS1Q9H1E3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NUCKS1Q9H1E3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
NUCKS1Q9H1E3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24.01■■□□□ 1.43
NUCKS1Q9H1E3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
NUCKS1Q9H1E3 UNC93B8-201ENST00000511903 705 ntBASIC24.01■■□□□ 1.43
NUCKS1Q9H1E3 AC092028.1-203ENST00000608262 953 ntBASIC24.01■■□□□ 1.43
NUCKS1Q9H1E3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NUCKS1Q9H1E3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NUCKS1Q9H1E3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NUCKS1Q9H1E3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NUCKS1Q9H1E3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NUCKS1Q9H1E3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.01■■□□□ 1.43
NUCKS1Q9H1E3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24■■□□□ 1.43
NUCKS1Q9H1E3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
NUCKS1Q9H1E3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC24■■□□□ 1.43
NUCKS1Q9H1E3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC24■■□□□ 1.43
NUCKS1Q9H1E3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC24■■□□□ 1.43
NUCKS1Q9H1E3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
NUCKS1Q9H1E3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
NUCKS1Q9H1E3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
NUCKS1Q9H1E3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
NUCKS1Q9H1E3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
NUCKS1Q9H1E3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
NUCKS1Q9H1E3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24■■□□□ 1.43
NUCKS1Q9H1E3 TSPY9P-201ENST00000440215 945 ntBASIC24■■□□□ 1.43
NUCKS1Q9H1E3 TSPY11P-201ENST00000442607 1045 ntBASIC24■■□□□ 1.43
NUCKS1Q9H1E3 MIR6722-201ENST00000617286 78 ntBASIC24■■□□□ 1.43
NUCKS1Q9H1E3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24■■□□□ 1.43
NUCKS1Q9H1E3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
NUCKS1Q9H1E3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
NUCKS1Q9H1E3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
NUCKS1Q9H1E3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
NUCKS1Q9H1E3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
NUCKS1Q9H1E3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.99■■□□□ 1.43
NUCKS1Q9H1E3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
NUCKS1Q9H1E3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
NUCKS1Q9H1E3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
NUCKS1Q9H1E3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.99■■□□□ 1.43
NUCKS1Q9H1E3 AC137767.1-201ENST00000602918 1920 ntBASIC23.99■■□□□ 1.43
NUCKS1Q9H1E3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms