Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
GAFA1Q96PS6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.52■□□□□ 0.56
GAFA1Q96PS6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.52■□□□□ 0.56
GAFA1Q96PS6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GAFA1Q96PS6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.52■□□□□ 0.56
GAFA1Q96PS6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.52■□□□□ 0.56
GAFA1Q96PS6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.52■□□□□ 0.56
GAFA1Q96PS6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.52■□□□□ 0.56
GAFA1Q96PS6 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
GAFA1Q96PS6 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
GAFA1Q96PS6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
GAFA1Q96PS6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GAFA1Q96PS6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GAFA1Q96PS6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GAFA1Q96PS6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.51■□□□□ 0.55
GAFA1Q96PS6 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.51■□□□□ 0.55
GAFA1Q96PS6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GAFA1Q96PS6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.51■□□□□ 0.55
GAFA1Q96PS6 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.51■□□□□ 0.55
GAFA1Q96PS6 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GAFA1Q96PS6 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.51■□□□□ 0.55
GAFA1Q96PS6 DUX4L19-201ENST00000557448 1267 ntBASIC18.51■□□□□ 0.55
GAFA1Q96PS6 MIR3181-201ENST00000578512 73 ntBASIC18.51■□□□□ 0.55
GAFA1Q96PS6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GAFA1Q96PS6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GAFA1Q96PS6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.51■□□□□ 0.55
GAFA1Q96PS6 SYT6-210ENST00000641643 1587 ntBASIC18.51■□□□□ 0.55
GAFA1Q96PS6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
GAFA1Q96PS6 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GAFA1Q96PS6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GAFA1Q96PS6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
GAFA1Q96PS6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
GAFA1Q96PS6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.5■□□□□ 0.55
GAFA1Q96PS6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GAFA1Q96PS6 SERBP1P1-201ENST00000396021 1160 ntBASIC18.5■□□□□ 0.55
GAFA1Q96PS6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.5■□□□□ 0.55
GAFA1Q96PS6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.5■□□□□ 0.55
GAFA1Q96PS6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GAFA1Q96PS6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.5■□□□□ 0.55
GAFA1Q96PS6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GAFA1Q96PS6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GAFA1Q96PS6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.49■□□□□ 0.55
GAFA1Q96PS6 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GAFA1Q96PS6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.49■□□□□ 0.55
GAFA1Q96PS6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GAFA1Q96PS6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
GAFA1Q96PS6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GAFA1Q96PS6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.49■□□□□ 0.55
GAFA1Q96PS6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GAFA1Q96PS6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GAFA1Q96PS6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
GAFA1Q96PS6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GAFA1Q96PS6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GAFA1Q96PS6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GAFA1Q96PS6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.48■□□□□ 0.55
GAFA1Q96PS6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GAFA1Q96PS6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GAFA1Q96PS6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.48■□□□□ 0.55
GAFA1Q96PS6 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.48■□□□□ 0.55
GAFA1Q96PS6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
GAFA1Q96PS6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GAFA1Q96PS6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.48■□□□□ 0.55
GAFA1Q96PS6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GAFA1Q96PS6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.48■□□□□ 0.55
GAFA1Q96PS6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.48■□□□□ 0.55
GAFA1Q96PS6 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.48■□□□□ 0.55
GAFA1Q96PS6 C9orf163-202ENST00000624034 2573 ntBASIC18.48■□□□□ 0.55
GAFA1Q96PS6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.48■□□□□ 0.55
GAFA1Q96PS6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GAFA1Q96PS6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
GAFA1Q96PS6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GAFA1Q96PS6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.47■□□□□ 0.55
GAFA1Q96PS6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
GAFA1Q96PS6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GAFA1Q96PS6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GAFA1Q96PS6 UNC93B3-201ENST00000308076 687 ntBASIC18.47■□□□□ 0.55
GAFA1Q96PS6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GAFA1Q96PS6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.47■□□□□ 0.55
GAFA1Q96PS6 AL138724.1-201ENST00000606771 1088 ntBASIC18.47■□□□□ 0.55
GAFA1Q96PS6 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.47■□□□□ 0.55
GAFA1Q96PS6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
GAFA1Q96PS6 AC004687.1-201ENST00000579003 1625 ntBASIC18.47■□□□□ 0.55
GAFA1Q96PS6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GAFA1Q96PS6 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.47■□□□□ 0.55
GAFA1Q96PS6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
GAFA1Q96PS6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
GAFA1Q96PS6 AC133637.1-201ENST00000624115 1537 ntBASIC18.47■□□□□ 0.55
GAFA1Q96PS6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
GAFA1Q96PS6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
GAFA1Q96PS6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GAFA1Q96PS6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GAFA1Q96PS6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GAFA1Q96PS6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
GAFA1Q96PS6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
GAFA1Q96PS6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GAFA1Q96PS6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.46■□□□□ 0.55
GAFA1Q96PS6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.46■□□□□ 0.55
GAFA1Q96PS6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GAFA1Q96PS6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GAFA1Q96PS6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms