Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.12■□□□□ 0.97
ITCHQ96J02 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ITCHQ96J02 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ITCHQ96J02 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ITCHQ96J02 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ITCHQ96J02 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.12■□□□□ 0.97
ITCHQ96J02 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ITCHQ96J02 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ITCHQ96J02 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.12■□□□□ 0.97
ITCHQ96J02 SNX5-217ENST00000606557 1087 ntBASIC21.12■□□□□ 0.97
ITCHQ96J02 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
ITCHQ96J02 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ITCHQ96J02 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ITCHQ96J02 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
ITCHQ96J02 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ITCHQ96J02 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ITCHQ96J02 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ITCHQ96J02 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.11■□□□□ 0.97
ITCHQ96J02 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ITCHQ96J02 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ITCHQ96J02 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
ITCHQ96J02 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ITCHQ96J02 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ITCHQ96J02 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ITCHQ96J02 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ITCHQ96J02 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ITCHQ96J02 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ITCHQ96J02 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ITCHQ96J02 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
ITCHQ96J02 AC144652.1-201ENST00000609974 1624 ntBASIC21.11■□□□□ 0.97
ITCHQ96J02 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.11■□□□□ 0.97
ITCHQ96J02 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
ITCHQ96J02 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ITCHQ96J02 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ITCHQ96J02 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
ITCHQ96J02 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ITCHQ96J02 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ITCHQ96J02 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
ITCHQ96J02 AC137767.1-201ENST00000602918 1920 ntBASIC21.1■□□□□ 0.97
ITCHQ96J02 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ITCHQ96J02 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ITCHQ96J02 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ITCHQ96J02 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.1■□□□□ 0.97
ITCHQ96J02 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.1■□□□□ 0.97
ITCHQ96J02 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.1■□□□□ 0.97
ITCHQ96J02 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.1■□□□□ 0.97
ITCHQ96J02 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.1■□□□□ 0.97
ITCHQ96J02 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
ITCHQ96J02 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ITCHQ96J02 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ITCHQ96J02 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ITCHQ96J02 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ITCHQ96J02 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ITCHQ96J02 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.09■□□□□ 0.97
ITCHQ96J02 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ITCHQ96J02 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ITCHQ96J02 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ITCHQ96J02 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.09■□□□□ 0.97
ITCHQ96J02 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ITCHQ96J02 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
ITCHQ96J02 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ITCHQ96J02 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ITCHQ96J02 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ITCHQ96J02 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ITCHQ96J02 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
ITCHQ96J02 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.08■□□□□ 0.97
ITCHQ96J02 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ITCHQ96J02 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
ITCHQ96J02 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ITCHQ96J02 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ITCHQ96J02 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.08■□□□□ 0.97
ITCHQ96J02 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ITCHQ96J02 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
ITCHQ96J02 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ITCHQ96J02 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.08■□□□□ 0.97
ITCHQ96J02 AC012354.3-201ENST00000623734 483 ntBASIC21.08■□□□□ 0.97
ITCHQ96J02 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.08■□□□□ 0.96
ITCHQ96J02 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ITCHQ96J02 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.08■□□□□ 0.96
ITCHQ96J02 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ITCHQ96J02 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ITCHQ96J02 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ITCHQ96J02 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ITCHQ96J02 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ITCHQ96J02 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
ITCHQ96J02 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ITCHQ96J02 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
ITCHQ96J02 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.07■□□□□ 0.96
ITCHQ96J02 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ITCHQ96J02 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
ITCHQ96J02 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ITCHQ96J02 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ITCHQ96J02 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.06■□□□□ 0.96
ITCHQ96J02 YBX1P4-201ENST00000392794 808 ntBASIC21.06■□□□□ 0.96
ITCHQ96J02 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.06■□□□□ 0.96
ITCHQ96J02 AC103834.1-201ENST00000520383 144 ntBASIC21.06■□□□□ 0.96
ITCHQ96J02 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.06■□□□□ 0.96
ITCHQ96J02 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
ITCHQ96J02 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ITCHQ96J02 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms