Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC9.29□□□□□ -0.92
SYNE2Q8WXH0 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SYNE2Q8WXH0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC9.29□□□□□ -0.92
SYNE2Q8WXH0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SYNE2Q8WXH0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
SYNE2Q8WXH0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC9.29□□□□□ -0.92
SYNE2Q8WXH0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
SYNE2Q8WXH0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC9.29□□□□□ -0.92
SYNE2Q8WXH0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
SYNE2Q8WXH0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SYNE2Q8WXH0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SYNE2Q8WXH0 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
SYNE2Q8WXH0 MIPEPP3-201ENST00000412105 444 ntBASIC9.28□□□□□ -0.92
SYNE2Q8WXH0 AC231657.2-201ENST00000624556 255 ntBASIC9.28□□□□□ -0.92
SYNE2Q8WXH0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
SYNE2Q8WXH0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
SYNE2Q8WXH0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC9.28□□□□□ -0.92
SYNE2Q8WXH0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
SYNE2Q8WXH0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
SYNE2Q8WXH0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC9.28□□□□□ -0.92
SYNE2Q8WXH0 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC9.28□□□□□ -0.92
SYNE2Q8WXH0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
SYNE2Q8WXH0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SYNE2Q8WXH0 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SYNE2Q8WXH0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC9.28□□□□□ -0.92
SYNE2Q8WXH0 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
SYNE2Q8WXH0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC9.28□□□□□ -0.92
SYNE2Q8WXH0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC9.28□□□□□ -0.92
SYNE2Q8WXH0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
SYNE2Q8WXH0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC9.28□□□□□ -0.92
SYNE2Q8WXH0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC9.28□□□□□ -0.92
SYNE2Q8WXH0 PPP1R14BP2-201ENST00000426284 444 ntBASIC9.28□□□□□ -0.92
SYNE2Q8WXH0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SYNE2Q8WXH0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC9.28□□□□□ -0.92
SYNE2Q8WXH0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SYNE2Q8WXH0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
SYNE2Q8WXH0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
SYNE2Q8WXH0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.92
SYNE2Q8WXH0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC9.27□□□□□ -0.92
SYNE2Q8WXH0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC9.27□□□□□ -0.92
SYNE2Q8WXH0 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
SYNE2Q8WXH0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC9.27□□□□□ -0.93
SYNE2Q8WXH0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
SYNE2Q8WXH0 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SYNE2Q8WXH0 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SYNE2Q8WXH0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC9.27□□□□□ -0.93
SYNE2Q8WXH0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
SYNE2Q8WXH0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SYNE2Q8WXH0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SYNE2Q8WXH0 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SYNE2Q8WXH0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC9.27□□□□□ -0.93
SYNE2Q8WXH0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
SYNE2Q8WXH0 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC9.27□□□□□ -0.93
SYNE2Q8WXH0 AC083880.1-201ENST00000608266 535 ntBASIC9.27□□□□□ -0.93
SYNE2Q8WXH0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SYNE2Q8WXH0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SYNE2Q8WXH0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC9.27□□□□□ -0.93
SYNE2Q8WXH0 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
SYNE2Q8WXH0 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SYNE2Q8WXH0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SYNE2Q8WXH0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SYNE2Q8WXH0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC9.27□□□□□ -0.93
SYNE2Q8WXH0 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC9.27□□□□□ -0.93
SYNE2Q8WXH0 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
SYNE2Q8WXH0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SYNE2Q8WXH0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SYNE2Q8WXH0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC9.26□□□□□ -0.93
SYNE2Q8WXH0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SYNE2Q8WXH0 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
SYNE2Q8WXH0 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
SYNE2Q8WXH0 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
SYNE2Q8WXH0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
SYNE2Q8WXH0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC9.26□□□□□ -0.93
SYNE2Q8WXH0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
SYNE2Q8WXH0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC9.26□□□□□ -0.93
SYNE2Q8WXH0 SHF-208ENST00000560734 1731 ntTSL 3 BASIC9.26□□□□□ -0.93
SYNE2Q8WXH0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SYNE2Q8WXH0 REST-206ENST00000612429 1376 ntTSL 5 BASIC9.26□□□□□ -0.93
SYNE2Q8WXH0 REST-207ENST00000616975 1370 ntTSL 5 BASIC9.26□□□□□ -0.93
SYNE2Q8WXH0 ABCB10P3-201ENST00000561950 2166 ntBASIC9.26□□□□□ -0.93
SYNE2Q8WXH0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SYNE2Q8WXH0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
SYNE2Q8WXH0 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SYNE2Q8WXH0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SYNE2Q8WXH0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
SYNE2Q8WXH0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SYNE2Q8WXH0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SYNE2Q8WXH0 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC9.26□□□□□ -0.93
SYNE2Q8WXH0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC9.26□□□□□ -0.93
SYNE2Q8WXH0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC9.25□□□□□ -0.93
SYNE2Q8WXH0 TOLLIP-AS1-201ENST00000530897 939 ntBASIC9.25□□□□□ -0.93
SYNE2Q8WXH0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
SYNE2Q8WXH0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC9.25□□□□□ -0.93
SYNE2Q8WXH0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC9.25□□□□□ -0.93
SYNE2Q8WXH0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
SYNE2Q8WXH0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC9.25□□□□□ -0.93
SYNE2Q8WXH0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC9.25□□□□□ -0.93
SYNE2Q8WXH0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC9.25□□□□□ -0.93
SYNE2Q8WXH0 NME3-204ENST00000563498 920 ntTSL 2 BASIC9.25□□□□□ -0.93
SYNE2Q8WXH0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC9.25□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms