Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC131274.2-201ENST00000580697 1507 ntBASIC18.64■□□□□ 0.57
RTN4IP1Q8WWV3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
RTN4IP1Q8WWV3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTN4IP1Q8WWV3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTN4IP1Q8WWV3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RTN4IP1Q8WWV3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.63■□□□□ 0.57
RTN4IP1Q8WWV3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.63■□□□□ 0.57
RTN4IP1Q8WWV3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.63■□□□□ 0.57
RTN4IP1Q8WWV3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RTN4IP1Q8WWV3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RTN4IP1Q8WWV3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTN4IP1Q8WWV3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTN4IP1Q8WWV3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RTN4IP1Q8WWV3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RTN4IP1Q8WWV3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.62■□□□□ 0.57
RTN4IP1Q8WWV3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.62■□□□□ 0.57
RTN4IP1Q8WWV3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTN4IP1Q8WWV3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTN4IP1Q8WWV3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTN4IP1Q8WWV3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTN4IP1Q8WWV3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTN4IP1Q8WWV3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RTN4IP1Q8WWV3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.61■□□□□ 0.57
RTN4IP1Q8WWV3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.61■□□□□ 0.57
RTN4IP1Q8WWV3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RTN4IP1Q8WWV3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
RTN4IP1Q8WWV3 AC137630.3-201ENST00000607245 391 ntBASIC18.61■□□□□ 0.57
RTN4IP1Q8WWV3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTN4IP1Q8WWV3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTN4IP1Q8WWV3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RTN4IP1Q8WWV3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTN4IP1Q8WWV3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTN4IP1Q8WWV3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTN4IP1Q8WWV3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RTN4IP1Q8WWV3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTN4IP1Q8WWV3 AC007375.3-201ENST00000600936 2314 ntBASIC18.6■□□□□ 0.57
RTN4IP1Q8WWV3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
RTN4IP1Q8WWV3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.6■□□□□ 0.57
RTN4IP1Q8WWV3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTN4IP1Q8WWV3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTN4IP1Q8WWV3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RTN4IP1Q8WWV3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.6■□□□□ 0.57
RTN4IP1Q8WWV3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTN4IP1Q8WWV3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTN4IP1Q8WWV3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.59■□□□□ 0.57
RTN4IP1Q8WWV3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTN4IP1Q8WWV3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RTN4IP1Q8WWV3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RTN4IP1Q8WWV3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTN4IP1Q8WWV3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.59■□□□□ 0.57
RTN4IP1Q8WWV3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
RTN4IP1Q8WWV3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTN4IP1Q8WWV3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RTN4IP1Q8WWV3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTN4IP1Q8WWV3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTN4IP1Q8WWV3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.59■□□□□ 0.57
RTN4IP1Q8WWV3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RTN4IP1Q8WWV3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTN4IP1Q8WWV3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
RTN4IP1Q8WWV3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
RTN4IP1Q8WWV3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
RTN4IP1Q8WWV3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.58■□□□□ 0.57
RTN4IP1Q8WWV3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.58■□□□□ 0.56
RTN4IP1Q8WWV3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RTN4IP1Q8WWV3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.58■□□□□ 0.56
RTN4IP1Q8WWV3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTN4IP1Q8WWV3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTN4IP1Q8WWV3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
RTN4IP1Q8WWV3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.58■□□□□ 0.56
RTN4IP1Q8WWV3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
RTN4IP1Q8WWV3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.58■□□□□ 0.56
RTN4IP1Q8WWV3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.58■□□□□ 0.56
RTN4IP1Q8WWV3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTN4IP1Q8WWV3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTN4IP1Q8WWV3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.58■□□□□ 0.56
RTN4IP1Q8WWV3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RTN4IP1Q8WWV3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTN4IP1Q8WWV3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4IP1Q8WWV3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4IP1Q8WWV3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.57■□□□□ 0.56
RTN4IP1Q8WWV3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4IP1Q8WWV3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4IP1Q8WWV3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RTN4IP1Q8WWV3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
RTN4IP1Q8WWV3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4IP1Q8WWV3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4IP1Q8WWV3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RTN4IP1Q8WWV3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4IP1Q8WWV3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.56■□□□□ 0.56
RTN4IP1Q8WWV3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RTN4IP1Q8WWV3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RTN4IP1Q8WWV3 BX664725.1-201ENST00000438252 379 ntBASIC18.56■□□□□ 0.56
RTN4IP1Q8WWV3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.56■□□□□ 0.56
RTN4IP1Q8WWV3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTN4IP1Q8WWV3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTN4IP1Q8WWV3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RTN4IP1Q8WWV3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.56■□□□□ 0.56
RTN4IP1Q8WWV3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RTN4IP1Q8WWV3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RTN4IP1Q8WWV3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms