Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
STAG1Q8WVM7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC26.32■■□□□ 1.8
STAG1Q8WVM7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
STAG1Q8WVM7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
STAG1Q8WVM7 AC133637.1-201ENST00000624115 1537 ntBASIC26.31■■□□□ 1.8
STAG1Q8WVM7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
STAG1Q8WVM7 EDA-201ENST00000338901 1233 ntBASIC26.31■■□□□ 1.8
STAG1Q8WVM7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC26.31■■□□□ 1.8
STAG1Q8WVM7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC26.31■■□□□ 1.8
STAG1Q8WVM7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC26.31■■□□□ 1.8
STAG1Q8WVM7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC26.3■■□□□ 1.8
STAG1Q8WVM7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
STAG1Q8WVM7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
STAG1Q8WVM7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
STAG1Q8WVM7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
STAG1Q8WVM7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
STAG1Q8WVM7 NFE2L3P1-201ENST00000588207 1959 ntBASIC26.3■■□□□ 1.8
STAG1Q8WVM7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
STAG1Q8WVM7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
STAG1Q8WVM7 AC142381.2-201ENST00000566120 298 ntBASIC26.3■■□□□ 1.8
STAG1Q8WVM7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC26.3■■□□□ 1.8
STAG1Q8WVM7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC26.3■■□□□ 1.8
STAG1Q8WVM7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
STAG1Q8WVM7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
STAG1Q8WVM7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.3■■□□□ 1.8
STAG1Q8WVM7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
STAG1Q8WVM7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
STAG1Q8WVM7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
STAG1Q8WVM7 MIR935-201ENST00000401179 91 ntBASIC26.29■■□□□ 1.8
STAG1Q8WVM7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC26.29■■□□□ 1.8
STAG1Q8WVM7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
STAG1Q8WVM7 MIR4767-201ENST00000582827 78 ntBASIC26.29■■□□□ 1.8
STAG1Q8WVM7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC26.29■■□□□ 1.8
STAG1Q8WVM7 AL355001.2-201ENST00000620617 1191 ntBASIC26.29■■□□□ 1.8
STAG1Q8WVM7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
STAG1Q8WVM7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.29■■□□□ 1.8
STAG1Q8WVM7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
STAG1Q8WVM7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
STAG1Q8WVM7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
STAG1Q8WVM7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
STAG1Q8WVM7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
STAG1Q8WVM7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC26.28■■□□□ 1.8
STAG1Q8WVM7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
STAG1Q8WVM7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
STAG1Q8WVM7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
STAG1Q8WVM7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
STAG1Q8WVM7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC26.28■■□□□ 1.8
STAG1Q8WVM7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
STAG1Q8WVM7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
STAG1Q8WVM7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC26.27■■□□□ 1.8
STAG1Q8WVM7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
STAG1Q8WVM7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.27■■□□□ 1.8
STAG1Q8WVM7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC26.27■■□□□ 1.8
STAG1Q8WVM7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
STAG1Q8WVM7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
STAG1Q8WVM7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
STAG1Q8WVM7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
STAG1Q8WVM7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC26.27■■□□□ 1.8
STAG1Q8WVM7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC26.27■■□□□ 1.8
STAG1Q8WVM7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.27■■□□□ 1.8
STAG1Q8WVM7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
STAG1Q8WVM7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
STAG1Q8WVM7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
STAG1Q8WVM7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
STAG1Q8WVM7 DUSP8P5-201ENST00000422884 1815 ntBASIC26.26■■□□□ 1.79
STAG1Q8WVM7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
STAG1Q8WVM7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
STAG1Q8WVM7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
STAG1Q8WVM7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC26.25■■□□□ 1.79
STAG1Q8WVM7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
STAG1Q8WVM7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC26.25■■□□□ 1.79
STAG1Q8WVM7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
STAG1Q8WVM7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
STAG1Q8WVM7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
STAG1Q8WVM7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
STAG1Q8WVM7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC26.24■■□□□ 1.79
STAG1Q8WVM7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
STAG1Q8WVM7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
STAG1Q8WVM7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
STAG1Q8WVM7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.24■■□□□ 1.79
STAG1Q8WVM7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC26.24■■□□□ 1.79
STAG1Q8WVM7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC26.24■■□□□ 1.79
STAG1Q8WVM7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC26.24■■□□□ 1.79
STAG1Q8WVM7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
STAG1Q8WVM7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
STAG1Q8WVM7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
STAG1Q8WVM7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC26.23■■□□□ 1.79
STAG1Q8WVM7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
STAG1Q8WVM7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
STAG1Q8WVM7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
STAG1Q8WVM7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC26.23■■□□□ 1.79
STAG1Q8WVM7 GRAMD4P4-201ENST00000613563 1115 ntBASIC26.23■■□□□ 1.79
STAG1Q8WVM7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC26.23■■□□□ 1.79
STAG1Q8WVM7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
STAG1Q8WVM7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
STAG1Q8WVM7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC26.22■■□□□ 1.79
STAG1Q8WVM7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
STAG1Q8WVM7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
STAG1Q8WVM7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
STAG1Q8WVM7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC26.22■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms