Protein–RNA interactions for Protein: Q8WVK7

SKA2, Spindle and kinetochore-associated protein 2, humanhuman

Predicted RBP Predictions only

Length 121 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2Q8WVK7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SKA2Q8WVK7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
SKA2Q8WVK7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
SKA2Q8WVK7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SKA2Q8WVK7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SKA2Q8WVK7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.95■■□□□ 1.1
SKA2Q8WVK7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.95■■□□□ 1.1
SKA2Q8WVK7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.95■■□□□ 1.1
SKA2Q8WVK7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.95■■□□□ 1.1
SKA2Q8WVK7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SKA2Q8WVK7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SKA2Q8WVK7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SKA2Q8WVK7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
SKA2Q8WVK7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SKA2Q8WVK7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.94■■□□□ 1.1
SKA2Q8WVK7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.94■■□□□ 1.1
SKA2Q8WVK7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SKA2Q8WVK7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.94■■□□□ 1.1
SKA2Q8WVK7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.94■■□□□ 1.1
SKA2Q8WVK7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SKA2Q8WVK7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
SKA2Q8WVK7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
SKA2Q8WVK7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.93■■□□□ 1.1
SKA2Q8WVK7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SKA2Q8WVK7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SKA2Q8WVK7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.93■■□□□ 1.1
SKA2Q8WVK7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
SKA2Q8WVK7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.93■■□□□ 1.1
SKA2Q8WVK7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.93■■□□□ 1.1
SKA2Q8WVK7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.92■■□□□ 1.1
SKA2Q8WVK7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SKA2Q8WVK7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SKA2Q8WVK7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
SKA2Q8WVK7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SKA2Q8WVK7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SKA2Q8WVK7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.92■■□□□ 1.1
SKA2Q8WVK7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SKA2Q8WVK7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
SKA2Q8WVK7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.92■■□□□ 1.1
SKA2Q8WVK7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.92■■□□□ 1.1
SKA2Q8WVK7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SKA2Q8WVK7 LINC01529-204ENST00000636474 1715 ntBASIC21.92■■□□□ 1.1
SKA2Q8WVK7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SKA2Q8WVK7 C17orf82-201ENST00000623772 1530 ntBASIC21.91■■□□□ 1.1
SKA2Q8WVK7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SKA2Q8WVK7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SKA2Q8WVK7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.91■■□□□ 1.1
SKA2Q8WVK7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SKA2Q8WVK7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.91■■□□□ 1.1
SKA2Q8WVK7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.91■■□□□ 1.1
SKA2Q8WVK7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.91■■□□□ 1.1
SKA2Q8WVK7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.91■■□□□ 1.1
SKA2Q8WVK7 DUSP8P3-201ENST00000399571 1760 ntBASIC21.91■■□□□ 1.1
SKA2Q8WVK7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SKA2Q8WVK7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SKA2Q8WVK7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SKA2Q8WVK7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
SKA2Q8WVK7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.9■■□□□ 1.1
SKA2Q8WVK7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SKA2Q8WVK7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SKA2Q8WVK7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SKA2Q8WVK7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SKA2Q8WVK7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
SKA2Q8WVK7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SKA2Q8WVK7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.89■■□□□ 1.1
SKA2Q8WVK7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
SKA2Q8WVK7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
SKA2Q8WVK7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
SKA2Q8WVK7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.89■■□□□ 1.09
SKA2Q8WVK7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.89■■□□□ 1.09
SKA2Q8WVK7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.89■■□□□ 1.09
SKA2Q8WVK7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SKA2Q8WVK7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.89■■□□□ 1.09
SKA2Q8WVK7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.89■■□□□ 1.09
SKA2Q8WVK7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
SKA2Q8WVK7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.89■■□□□ 1.09
SKA2Q8WVK7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SKA2Q8WVK7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
SKA2Q8WVK7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SKA2Q8WVK7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.88■■□□□ 1.09
SKA2Q8WVK7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SKA2Q8WVK7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SKA2Q8WVK7 SRD5A1P1-201ENST00000442297 786 ntBASIC21.88■■□□□ 1.09
SKA2Q8WVK7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.88■■□□□ 1.09
SKA2Q8WVK7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.88■■□□□ 1.09
SKA2Q8WVK7 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.88■■□□□ 1.09
SKA2Q8WVK7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SKA2Q8WVK7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SKA2Q8WVK7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SKA2Q8WVK7 FP325331.1-202ENST00000623531 1380 ntBASIC21.87■■□□□ 1.09
SKA2Q8WVK7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SKA2Q8WVK7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SKA2Q8WVK7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SKA2Q8WVK7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SKA2Q8WVK7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.87■■□□□ 1.09
SKA2Q8WVK7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.87■■□□□ 1.09
SKA2Q8WVK7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SKA2Q8WVK7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.87■■□□□ 1.09
SKA2Q8WVK7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SKA2Q8WVK7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms