Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.17■□□□□ 0.98
SRFBP1Q8NEF9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SRFBP1Q8NEF9 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRFBP1Q8NEF9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SRFBP1Q8NEF9 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
SRFBP1Q8NEF9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRFBP1Q8NEF9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRFBP1Q8NEF9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.17■□□□□ 0.98
SRFBP1Q8NEF9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
SRFBP1Q8NEF9 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRFBP1Q8NEF9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
SRFBP1Q8NEF9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRFBP1Q8NEF9 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SRFBP1Q8NEF9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.16■□□□□ 0.98
SRFBP1Q8NEF9 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SRFBP1Q8NEF9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.16■□□□□ 0.98
SRFBP1Q8NEF9 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.16■□□□□ 0.98
SRFBP1Q8NEF9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
SRFBP1Q8NEF9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRFBP1Q8NEF9 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.15■□□□□ 0.98
SRFBP1Q8NEF9 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRFBP1Q8NEF9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.15■□□□□ 0.98
SRFBP1Q8NEF9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRFBP1Q8NEF9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SRFBP1Q8NEF9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
SRFBP1Q8NEF9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.15■□□□□ 0.98
SRFBP1Q8NEF9 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRFBP1Q8NEF9 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRFBP1Q8NEF9 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
SRFBP1Q8NEF9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.14■□□□□ 0.97
SRFBP1Q8NEF9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SRFBP1Q8NEF9 AC131281.2-201ENST00000520478 145 ntBASIC21.14■□□□□ 0.97
SRFBP1Q8NEF9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.14■□□□□ 0.97
SRFBP1Q8NEF9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SRFBP1Q8NEF9 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SRFBP1Q8NEF9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRFBP1Q8NEF9 DUX4L19-201ENST00000557448 1267 ntBASIC21.14■□□□□ 0.97
SRFBP1Q8NEF9 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SRFBP1Q8NEF9 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRFBP1Q8NEF9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.13■□□□□ 0.97
SRFBP1Q8NEF9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRFBP1Q8NEF9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRFBP1Q8NEF9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRFBP1Q8NEF9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SRFBP1Q8NEF9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.13■□□□□ 0.97
SRFBP1Q8NEF9 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SRFBP1Q8NEF9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SRFBP1Q8NEF9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SRFBP1Q8NEF9 AC099791.2-201ENST00000605725 427 ntBASIC21.13■□□□□ 0.97
SRFBP1Q8NEF9 AL499627.2-201ENST00000606283 725 ntBASIC21.13■□□□□ 0.97
SRFBP1Q8NEF9 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SRFBP1Q8NEF9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.13■□□□□ 0.97
SRFBP1Q8NEF9 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SRFBP1Q8NEF9 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SRFBP1Q8NEF9 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRFBP1Q8NEF9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRFBP1Q8NEF9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.12■□□□□ 0.97
SRFBP1Q8NEF9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.12■□□□□ 0.97
SRFBP1Q8NEF9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.12■□□□□ 0.97
SRFBP1Q8NEF9 MIR4466-201ENST00000606121 54 ntBASIC21.12■□□□□ 0.97
SRFBP1Q8NEF9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRFBP1Q8NEF9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRFBP1Q8NEF9 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRFBP1Q8NEF9 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.12■□□□□ 0.97
SRFBP1Q8NEF9 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.12■□□□□ 0.97
SRFBP1Q8NEF9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRFBP1Q8NEF9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.12■□□□□ 0.97
SRFBP1Q8NEF9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRFBP1Q8NEF9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.11■□□□□ 0.97
SRFBP1Q8NEF9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRFBP1Q8NEF9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRFBP1Q8NEF9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.11■□□□□ 0.97
SRFBP1Q8NEF9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.11■□□□□ 0.97
SRFBP1Q8NEF9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRFBP1Q8NEF9 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.11■□□□□ 0.97
SRFBP1Q8NEF9 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SRFBP1Q8NEF9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.1■□□□□ 0.97
SRFBP1Q8NEF9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRFBP1Q8NEF9 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SRFBP1Q8NEF9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRFBP1Q8NEF9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRFBP1Q8NEF9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRFBP1Q8NEF9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRFBP1Q8NEF9 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
SRFBP1Q8NEF9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRFBP1Q8NEF9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.1■□□□□ 0.97
SRFBP1Q8NEF9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.1■□□□□ 0.97
SRFBP1Q8NEF9 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRFBP1Q8NEF9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRFBP1Q8NEF9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRFBP1Q8NEF9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.1■□□□□ 0.97
SRFBP1Q8NEF9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.1■□□□□ 0.97
SRFBP1Q8NEF9 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SRFBP1Q8NEF9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRFBP1Q8NEF9 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRFBP1Q8NEF9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRFBP1Q8NEF9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRFBP1Q8NEF9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SRFBP1Q8NEF9 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRFBP1Q8NEF9 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms