Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC168Q8NDH2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC168Q8NDH2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC168Q8NDH2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC168Q8NDH2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC168Q8NDH2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC168Q8NDH2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC168Q8NDH2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC168Q8NDH2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC168Q8NDH2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC168Q8NDH2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC168Q8NDH2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC168Q8NDH2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC168Q8NDH2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.81■□□□□ 0.6
CCDC168Q8NDH2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC168Q8NDH2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC168Q8NDH2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC168Q8NDH2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC168Q8NDH2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC168Q8NDH2 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC168Q8NDH2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC168Q8NDH2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC168Q8NDH2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC168Q8NDH2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CCDC168Q8NDH2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC168Q8NDH2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC168Q8NDH2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCDC168Q8NDH2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCDC168Q8NDH2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC168Q8NDH2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.79■□□□□ 0.6
CCDC168Q8NDH2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC168Q8NDH2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCDC168Q8NDH2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC168Q8NDH2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC168Q8NDH2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC168Q8NDH2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCDC168Q8NDH2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC168Q8NDH2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC168Q8NDH2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC168Q8NDH2 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCDC168Q8NDH2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC168Q8NDH2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC168Q8NDH2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.78■□□□□ 0.6
CCDC168Q8NDH2 OR2I1P-207ENST00000453522 948 ntBASIC18.78■□□□□ 0.6
CCDC168Q8NDH2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC168Q8NDH2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC168Q8NDH2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC168Q8NDH2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC168Q8NDH2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC168Q8NDH2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.78■□□□□ 0.6
CCDC168Q8NDH2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC168Q8NDH2 BX005040.4-201ENST00000637145 1518 ntBASIC18.77■□□□□ 0.6
CCDC168Q8NDH2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CCDC168Q8NDH2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC168Q8NDH2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC168Q8NDH2 AC005181.1-201ENST00000604782 1256 ntBASIC18.77■□□□□ 0.6
CCDC168Q8NDH2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC168Q8NDH2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC168Q8NDH2 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC168Q8NDH2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC168Q8NDH2 KRT18P29-201ENST00000397031 1267 ntBASIC18.77■□□□□ 0.59
CCDC168Q8NDH2 AC007322.1-201ENST00000426983 750 ntBASIC18.77■□□□□ 0.59
CCDC168Q8NDH2 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.77■□□□□ 0.59
CCDC168Q8NDH2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
CCDC168Q8NDH2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC168Q8NDH2 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC168Q8NDH2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC168Q8NDH2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC168Q8NDH2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CCDC168Q8NDH2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CCDC168Q8NDH2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC168Q8NDH2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC168Q8NDH2 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC168Q8NDH2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC168Q8NDH2 DUX4L16-201ENST00000555130 1264 ntBASIC18.76■□□□□ 0.59
CCDC168Q8NDH2 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC168Q8NDH2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC168Q8NDH2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC168Q8NDH2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC168Q8NDH2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC168Q8NDH2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC168Q8NDH2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC168Q8NDH2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC168Q8NDH2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC168Q8NDH2 GCSHP5-201ENST00000443090 522 ntBASIC18.75■□□□□ 0.59
CCDC168Q8NDH2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CCDC168Q8NDH2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC168Q8NDH2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC168Q8NDH2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC168Q8NDH2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC168Q8NDH2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC168Q8NDH2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC168Q8NDH2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC168Q8NDH2 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC168Q8NDH2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC168Q8NDH2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC168Q8NDH2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
CCDC168Q8NDH2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC168Q8NDH2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC168Q8NDH2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms