Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF169Q8NCN4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF169Q8NCN4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
RNF169Q8NCN4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF169Q8NCN4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.21■■□□□ 1.47
RNF169Q8NCN4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RNF169Q8NCN4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF169Q8NCN4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RNF169Q8NCN4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
RNF169Q8NCN4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.47
RNF169Q8NCN4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
RNF169Q8NCN4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
RNF169Q8NCN4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.2■■□□□ 1.46
RNF169Q8NCN4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC24.2■■□□□ 1.46
RNF169Q8NCN4 AL031602.1-201ENST00000633169 911 ntBASIC24.2■■□□□ 1.46
RNF169Q8NCN4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC24.2■■□□□ 1.46
RNF169Q8NCN4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
RNF169Q8NCN4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RNF169Q8NCN4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.19■■□□□ 1.46
RNF169Q8NCN4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC24.19■■□□□ 1.46
RNF169Q8NCN4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
RNF169Q8NCN4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC24.19■■□□□ 1.46
RNF169Q8NCN4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RNF169Q8NCN4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RNF169Q8NCN4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RNF169Q8NCN4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
RNF169Q8NCN4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RNF169Q8NCN4 YBX1P1-201ENST00000445822 960 ntBASIC24.19■■□□□ 1.46
RNF169Q8NCN4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RNF169Q8NCN4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RNF169Q8NCN4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RNF169Q8NCN4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
RNF169Q8NCN4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RNF169Q8NCN4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RNF169Q8NCN4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF169Q8NCN4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF169Q8NCN4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.18■■□□□ 1.46
RNF169Q8NCN4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
RNF169Q8NCN4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RNF169Q8NCN4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.18■■□□□ 1.46
RNF169Q8NCN4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.18■■□□□ 1.46
RNF169Q8NCN4 AL139125.2-201ENST00000623134 1869 ntBASIC24.17■■□□□ 1.46
RNF169Q8NCN4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RNF169Q8NCN4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC24.17■■□□□ 1.46
RNF169Q8NCN4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF169Q8NCN4 AC034268.1-201ENST00000441047 882 ntBASIC24.17■■□□□ 1.46
RNF169Q8NCN4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.17■■□□□ 1.46
RNF169Q8NCN4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.17■■□□□ 1.46
RNF169Q8NCN4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RNF169Q8NCN4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF169Q8NCN4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF169Q8NCN4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF169Q8NCN4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
RNF169Q8NCN4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF169Q8NCN4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.16■■□□□ 1.46
RNF169Q8NCN4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.16■■□□□ 1.46
RNF169Q8NCN4 MIR572-201ENST00000384983 95 ntBASIC24.16■■□□□ 1.46
RNF169Q8NCN4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.16■■□□□ 1.46
RNF169Q8NCN4 OR2I1P-207ENST00000453522 948 ntBASIC24.16■■□□□ 1.46
RNF169Q8NCN4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC24.16■■□□□ 1.46
RNF169Q8NCN4 AL358852.1-201ENST00000623174 1268 ntBASIC24.16■■□□□ 1.46
RNF169Q8NCN4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.15■■□□□ 1.46
RNF169Q8NCN4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF169Q8NCN4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
RNF169Q8NCN4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
RNF169Q8NCN4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.15■■□□□ 1.46
RNF169Q8NCN4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF169Q8NCN4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF169Q8NCN4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
RNF169Q8NCN4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RNF169Q8NCN4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.15■■□□□ 1.46
RNF169Q8NCN4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RNF169Q8NCN4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF169Q8NCN4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
RNF169Q8NCN4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC24.14■■□□□ 1.46
RNF169Q8NCN4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.14■■□□□ 1.46
RNF169Q8NCN4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.14■■□□□ 1.46
RNF169Q8NCN4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
RNF169Q8NCN4 AC004812.2-201ENST00000611079 2094 ntBASIC24.14■■□□□ 1.46
RNF169Q8NCN4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
RNF169Q8NCN4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RNF169Q8NCN4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
RNF169Q8NCN4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.14■■□□□ 1.45
RNF169Q8NCN4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.14■■□□□ 1.45
RNF169Q8NCN4 AC012414.1-201ENST00000556676 535 ntBASIC24.14■■□□□ 1.45
RNF169Q8NCN4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.14■■□□□ 1.45
RNF169Q8NCN4 LINC00543-201ENST00000567234 1845 ntBASIC24.14■■□□□ 1.45
RNF169Q8NCN4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RNF169Q8NCN4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RNF169Q8NCN4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
RNF169Q8NCN4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
RNF169Q8NCN4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
RNF169Q8NCN4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RNF169Q8NCN4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RNF169Q8NCN4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.13■■□□□ 1.45
RNF169Q8NCN4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RNF169Q8NCN4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RNF169Q8NCN4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RNF169Q8NCN4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.13■■□□□ 1.45
RNF169Q8NCN4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms