Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN22Q8N7P3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN22Q8N7P3 AL031848.2-201ENST00000607670 837 ntBASIC20.23■□□□□ 0.83
CLDN22Q8N7P3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN22Q8N7P3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN22Q8N7P3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN22Q8N7P3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CLDN22Q8N7P3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CLDN22Q8N7P3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN22Q8N7P3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN22Q8N7P3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN22Q8N7P3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.22■□□□□ 0.83
CLDN22Q8N7P3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN22Q8N7P3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CLDN22Q8N7P3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.22■□□□□ 0.83
CLDN22Q8N7P3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN22Q8N7P3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CLDN22Q8N7P3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.22■□□□□ 0.83
CLDN22Q8N7P3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.22■□□□□ 0.83
CLDN22Q8N7P3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.22■□□□□ 0.83
CLDN22Q8N7P3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.22■□□□□ 0.83
CLDN22Q8N7P3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.22■□□□□ 0.83
CLDN22Q8N7P3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN22Q8N7P3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN22Q8N7P3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN22Q8N7P3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN22Q8N7P3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN22Q8N7P3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CLDN22Q8N7P3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN22Q8N7P3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CLDN22Q8N7P3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN22Q8N7P3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN22Q8N7P3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.21■□□□□ 0.83
CLDN22Q8N7P3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN22Q8N7P3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.21■□□□□ 0.83
CLDN22Q8N7P3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN22Q8N7P3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN22Q8N7P3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.21■□□□□ 0.83
CLDN22Q8N7P3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN22Q8N7P3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN22Q8N7P3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN22Q8N7P3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.21■□□□□ 0.83
CLDN22Q8N7P3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.21■□□□□ 0.83
CLDN22Q8N7P3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
CLDN22Q8N7P3 AC007375.3-201ENST00000600936 2314 ntBASIC20.2■□□□□ 0.82
CLDN22Q8N7P3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN22Q8N7P3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN22Q8N7P3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN22Q8N7P3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.2■□□□□ 0.82
CLDN22Q8N7P3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.2■□□□□ 0.82
CLDN22Q8N7P3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN22Q8N7P3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN22Q8N7P3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN22Q8N7P3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN22Q8N7P3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN22Q8N7P3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CLDN22Q8N7P3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CLDN22Q8N7P3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.19■□□□□ 0.82
CLDN22Q8N7P3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN22Q8N7P3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN22Q8N7P3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.19■□□□□ 0.82
CLDN22Q8N7P3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN22Q8N7P3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN22Q8N7P3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.19■□□□□ 0.82
CLDN22Q8N7P3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.19■□□□□ 0.82
CLDN22Q8N7P3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN22Q8N7P3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN22Q8N7P3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN22Q8N7P3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CLDN22Q8N7P3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.18■□□□□ 0.82
CLDN22Q8N7P3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN22Q8N7P3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.18■□□□□ 0.82
CLDN22Q8N7P3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN22Q8N7P3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN22Q8N7P3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.18■□□□□ 0.82
CLDN22Q8N7P3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.17■□□□□ 0.82
CLDN22Q8N7P3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN22Q8N7P3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN22Q8N7P3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN22Q8N7P3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN22Q8N7P3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN22Q8N7P3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN22Q8N7P3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN22Q8N7P3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN22Q8N7P3 SNX5-217ENST00000606557 1087 ntBASIC20.17■□□□□ 0.82
CLDN22Q8N7P3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN22Q8N7P3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.17■□□□□ 0.82
CLDN22Q8N7P3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.17■□□□□ 0.82
CLDN22Q8N7P3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN22Q8N7P3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CLDN22Q8N7P3 AC144652.1-201ENST00000609974 1624 ntBASIC20.16■□□□□ 0.82
CLDN22Q8N7P3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN22Q8N7P3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN22Q8N7P3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN22Q8N7P3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.16■□□□□ 0.82
CLDN22Q8N7P3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
CLDN22Q8N7P3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN22Q8N7P3 AC137630.3-201ENST00000607245 391 ntBASIC20.16■□□□□ 0.82
CLDN22Q8N7P3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN22Q8N7P3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms