Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AC133561.4-201ENST00000566112 224 ntBASIC22.05■■□□□ 1.12
TRAM1L1Q8N609 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRAM1L1Q8N609 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TRAM1L1Q8N609 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRAM1L1Q8N609 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.05■■□□□ 1.12
TRAM1L1Q8N609 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRAM1L1Q8N609 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRAM1L1Q8N609 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.04■■□□□ 1.12
TRAM1L1Q8N609 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRAM1L1Q8N609 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRAM1L1Q8N609 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRAM1L1Q8N609 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.04■■□□□ 1.12
TRAM1L1Q8N609 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
TRAM1L1Q8N609 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.04■■□□□ 1.12
TRAM1L1Q8N609 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
TRAM1L1Q8N609 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.04■■□□□ 1.12
TRAM1L1Q8N609 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRAM1L1Q8N609 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRAM1L1Q8N609 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
TRAM1L1Q8N609 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRAM1L1Q8N609 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRAM1L1Q8N609 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRAM1L1Q8N609 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRAM1L1Q8N609 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.03■■□□□ 1.12
TRAM1L1Q8N609 MIR4767-201ENST00000582827 78 ntBASIC22.03■■□□□ 1.12
TRAM1L1Q8N609 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.03■■□□□ 1.12
TRAM1L1Q8N609 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRAM1L1Q8N609 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRAM1L1Q8N609 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
TRAM1L1Q8N609 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRAM1L1Q8N609 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.03■■□□□ 1.12
TRAM1L1Q8N609 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRAM1L1Q8N609 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TRAM1L1Q8N609 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRAM1L1Q8N609 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
TRAM1L1Q8N609 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
TRAM1L1Q8N609 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TRAM1L1Q8N609 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.02■■□□□ 1.12
TRAM1L1Q8N609 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TRAM1L1Q8N609 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.02■■□□□ 1.12
TRAM1L1Q8N609 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
TRAM1L1Q8N609 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.02■■□□□ 1.12
TRAM1L1Q8N609 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
TRAM1L1Q8N609 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.02■■□□□ 1.11
TRAM1L1Q8N609 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRAM1L1Q8N609 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.01■■□□□ 1.11
TRAM1L1Q8N609 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.01■■□□□ 1.11
TRAM1L1Q8N609 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRAM1L1Q8N609 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRAM1L1Q8N609 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRAM1L1Q8N609 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRAM1L1Q8N609 EDA-201ENST00000338901 1233 ntBASIC22.01■■□□□ 1.11
TRAM1L1Q8N609 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.01■■□□□ 1.11
TRAM1L1Q8N609 DUSP8P5-201ENST00000422884 1815 ntBASIC22.01■■□□□ 1.11
TRAM1L1Q8N609 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
TRAM1L1Q8N609 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRAM1L1Q8N609 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22■■□□□ 1.11
TRAM1L1Q8N609 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRAM1L1Q8N609 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
TRAM1L1Q8N609 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22■■□□□ 1.11
TRAM1L1Q8N609 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22■■□□□ 1.11
TRAM1L1Q8N609 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
TRAM1L1Q8N609 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
TRAM1L1Q8N609 MIR638-201ENST00000385237 100 ntBASIC22■■□□□ 1.11
TRAM1L1Q8N609 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22■■□□□ 1.11
TRAM1L1Q8N609 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22■■□□□ 1.11
TRAM1L1Q8N609 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
TRAM1L1Q8N609 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22■■□□□ 1.11
TRAM1L1Q8N609 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22■■□□□ 1.11
TRAM1L1Q8N609 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRAM1L1Q8N609 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.99■■□□□ 1.11
TRAM1L1Q8N609 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.99■■□□□ 1.11
TRAM1L1Q8N609 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.99■■□□□ 1.11
TRAM1L1Q8N609 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.99■■□□□ 1.11
TRAM1L1Q8N609 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.99■■□□□ 1.11
TRAM1L1Q8N609 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRAM1L1Q8N609 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TRAM1L1Q8N609 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
TRAM1L1Q8N609 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRAM1L1Q8N609 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRAM1L1Q8N609 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
TRAM1L1Q8N609 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRAM1L1Q8N609 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.98■■□□□ 1.11
TRAM1L1Q8N609 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRAM1L1Q8N609 AL355001.2-201ENST00000620617 1191 ntBASIC21.98■■□□□ 1.11
TRAM1L1Q8N609 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.98■■□□□ 1.11
TRAM1L1Q8N609 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRAM1L1Q8N609 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRAM1L1Q8N609 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.98■■□□□ 1.11
TRAM1L1Q8N609 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.98■■□□□ 1.11
TRAM1L1Q8N609 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRAM1L1Q8N609 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.97■■□□□ 1.11
TRAM1L1Q8N609 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.97■■□□□ 1.11
TRAM1L1Q8N609 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRAM1L1Q8N609 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.97■■□□□ 1.11
TRAM1L1Q8N609 AL031432.3-201ENST00000607698 485 ntBASIC21.97■■□□□ 1.11
TRAM1L1Q8N609 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.97■■□□□ 1.11
TRAM1L1Q8N609 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.97■■□□□ 1.11
TRAM1L1Q8N609 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.97■■□□□ 1.11
TRAM1L1Q8N609 AC004687.1-201ENST00000579003 1625 ntBASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms