Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.67■■□□□ 1.38
TTC39CQ8N584 AC133637.1-201ENST00000624115 1537 ntBASIC23.67■■□□□ 1.38
TTC39CQ8N584 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.67■■□□□ 1.38
TTC39CQ8N584 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TTC39CQ8N584 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TTC39CQ8N584 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TTC39CQ8N584 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.66■■□□□ 1.38
TTC39CQ8N584 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.66■■□□□ 1.38
TTC39CQ8N584 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TTC39CQ8N584 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TTC39CQ8N584 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TTC39CQ8N584 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TTC39CQ8N584 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TTC39CQ8N584 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TTC39CQ8N584 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TTC39CQ8N584 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TTC39CQ8N584 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TTC39CQ8N584 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.66■■□□□ 1.38
TTC39CQ8N584 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TTC39CQ8N584 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TTC39CQ8N584 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.66■■□□□ 1.38
TTC39CQ8N584 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.66■■□□□ 1.38
TTC39CQ8N584 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TTC39CQ8N584 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TTC39CQ8N584 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
TTC39CQ8N584 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.65■■□□□ 1.38
TTC39CQ8N584 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TTC39CQ8N584 UNC93B3-201ENST00000308076 687 ntBASIC23.65■■□□□ 1.38
TTC39CQ8N584 AC136469.2-201ENST00000623944 1028 ntBASIC23.65■■□□□ 1.38
TTC39CQ8N584 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.65■■□□□ 1.38
TTC39CQ8N584 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TTC39CQ8N584 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.65■■□□□ 1.38
TTC39CQ8N584 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
TTC39CQ8N584 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TTC39CQ8N584 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TTC39CQ8N584 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.64■■□□□ 1.38
TTC39CQ8N584 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.64■■□□□ 1.38
TTC39CQ8N584 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.64■■□□□ 1.38
TTC39CQ8N584 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TTC39CQ8N584 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TTC39CQ8N584 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TTC39CQ8N584 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TTC39CQ8N584 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TTC39CQ8N584 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
TTC39CQ8N584 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TTC39CQ8N584 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TTC39CQ8N584 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.64■■□□□ 1.37
TTC39CQ8N584 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
TTC39CQ8N584 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TTC39CQ8N584 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
TTC39CQ8N584 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
TTC39CQ8N584 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TTC39CQ8N584 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.63■■□□□ 1.37
TTC39CQ8N584 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.63■■□□□ 1.37
TTC39CQ8N584 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.63■■□□□ 1.37
TTC39CQ8N584 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TTC39CQ8N584 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.63■■□□□ 1.37
TTC39CQ8N584 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.63■■□□□ 1.37
TTC39CQ8N584 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
TTC39CQ8N584 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
TTC39CQ8N584 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
TTC39CQ8N584 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TTC39CQ8N584 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TTC39CQ8N584 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TTC39CQ8N584 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TTC39CQ8N584 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.62■■□□□ 1.37
TTC39CQ8N584 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TTC39CQ8N584 AC096631.2-201ENST00000436136 790 ntBASIC23.62■■□□□ 1.37
TTC39CQ8N584 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.62■■□□□ 1.37
TTC39CQ8N584 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.62■■□□□ 1.37
TTC39CQ8N584 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TTC39CQ8N584 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.62■■□□□ 1.37
TTC39CQ8N584 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.61■■□□□ 1.37
TTC39CQ8N584 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
TTC39CQ8N584 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
TTC39CQ8N584 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.61■■□□□ 1.37
TTC39CQ8N584 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
TTC39CQ8N584 AL136162.1-201ENST00000607711 1078 ntBASIC23.61■■□□□ 1.37
TTC39CQ8N584 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.61■■□□□ 1.37
TTC39CQ8N584 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TTC39CQ8N584 AC135279.3-201ENST00000610945 1311 ntBASIC23.6■■□□□ 1.37
TTC39CQ8N584 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
TTC39CQ8N584 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
TTC39CQ8N584 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
TTC39CQ8N584 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.6■■□□□ 1.37
TTC39CQ8N584 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
TTC39CQ8N584 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TTC39CQ8N584 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
TTC39CQ8N584 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TTC39CQ8N584 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TTC39CQ8N584 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TTC39CQ8N584 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TTC39CQ8N584 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
TTC39CQ8N584 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
TTC39CQ8N584 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
TTC39CQ8N584 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TTC39CQ8N584 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.59■■□□□ 1.37
TTC39CQ8N584 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.59■■□□□ 1.37
TTC39CQ8N584 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
TTC39CQ8N584 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms