Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPNE9Q8IYJ1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.95■■□□□ 1.1
CPNE9Q8IYJ1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPNE9Q8IYJ1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPNE9Q8IYJ1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.95■■□□□ 1.1
CPNE9Q8IYJ1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.95■■□□□ 1.1
CPNE9Q8IYJ1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.95■■□□□ 1.1
CPNE9Q8IYJ1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPNE9Q8IYJ1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.95■■□□□ 1.1
CPNE9Q8IYJ1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPNE9Q8IYJ1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CPNE9Q8IYJ1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPNE9Q8IYJ1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CPNE9Q8IYJ1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPNE9Q8IYJ1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPNE9Q8IYJ1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPNE9Q8IYJ1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.94■■□□□ 1.1
CPNE9Q8IYJ1 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.94■■□□□ 1.1
CPNE9Q8IYJ1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CPNE9Q8IYJ1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CPNE9Q8IYJ1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.94■■□□□ 1.1
CPNE9Q8IYJ1 LINC01529-204ENST00000636474 1715 ntBASIC21.94■■□□□ 1.1
CPNE9Q8IYJ1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.94■■□□□ 1.1
CPNE9Q8IYJ1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPNE9Q8IYJ1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPNE9Q8IYJ1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPNE9Q8IYJ1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CPNE9Q8IYJ1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPNE9Q8IYJ1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.93■■□□□ 1.1
CPNE9Q8IYJ1 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.93■■□□□ 1.1
CPNE9Q8IYJ1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.93■■□□□ 1.1
CPNE9Q8IYJ1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.93■■□□□ 1.1
CPNE9Q8IYJ1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPNE9Q8IYJ1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.92■■□□□ 1.1
CPNE9Q8IYJ1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.92■■□□□ 1.1
CPNE9Q8IYJ1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPNE9Q8IYJ1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.92■■□□□ 1.1
CPNE9Q8IYJ1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CPNE9Q8IYJ1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPNE9Q8IYJ1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPNE9Q8IYJ1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.92■■□□□ 1.1
CPNE9Q8IYJ1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.92■■□□□ 1.1
CPNE9Q8IYJ1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CPNE9Q8IYJ1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CPNE9Q8IYJ1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE9Q8IYJ1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.91■■□□□ 1.1
CPNE9Q8IYJ1 C17orf82-201ENST00000623772 1530 ntBASIC21.91■■□□□ 1.1
CPNE9Q8IYJ1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE9Q8IYJ1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE9Q8IYJ1 FP325331.1-202ENST00000623531 1380 ntBASIC21.91■■□□□ 1.1
CPNE9Q8IYJ1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE9Q8IYJ1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE9Q8IYJ1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.91■■□□□ 1.1
CPNE9Q8IYJ1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CPNE9Q8IYJ1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE9Q8IYJ1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE9Q8IYJ1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE9Q8IYJ1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE9Q8IYJ1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE9Q8IYJ1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CPNE9Q8IYJ1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CPNE9Q8IYJ1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE9Q8IYJ1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE9Q8IYJ1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE9Q8IYJ1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.9■■□□□ 1.1
CPNE9Q8IYJ1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.9■■□□□ 1.1
CPNE9Q8IYJ1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE9Q8IYJ1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE9Q8IYJ1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.9■■□□□ 1.1
CPNE9Q8IYJ1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE9Q8IYJ1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CPNE9Q8IYJ1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CPNE9Q8IYJ1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CPNE9Q8IYJ1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CPNE9Q8IYJ1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CPNE9Q8IYJ1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.89■■□□□ 1.09
CPNE9Q8IYJ1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.89■■□□□ 1.09
CPNE9Q8IYJ1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.89■■□□□ 1.09
CPNE9Q8IYJ1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.89■■□□□ 1.09
CPNE9Q8IYJ1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CPNE9Q8IYJ1 AL117332.1-201ENST00000622628 974 ntBASIC21.89■■□□□ 1.09
CPNE9Q8IYJ1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CPNE9Q8IYJ1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CPNE9Q8IYJ1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CPNE9Q8IYJ1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CPNE9Q8IYJ1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CPNE9Q8IYJ1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.89■■□□□ 1.09
CPNE9Q8IYJ1 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.89■■□□□ 1.09
CPNE9Q8IYJ1 AC233723.2-201ENST00000623798 2106 ntBASIC21.89■■□□□ 1.09
CPNE9Q8IYJ1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CPNE9Q8IYJ1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CPNE9Q8IYJ1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPNE9Q8IYJ1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPNE9Q8IYJ1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.88■■□□□ 1.09
CPNE9Q8IYJ1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CPNE9Q8IYJ1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.88■■□□□ 1.09
CPNE9Q8IYJ1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.88■■□□□ 1.09
CPNE9Q8IYJ1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.88■■□□□ 1.09
CPNE9Q8IYJ1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPNE9Q8IYJ1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms