Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
C9orf40Q8IXQ3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.6■□□□□ 0.89
C9orf40Q8IXQ3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.6■□□□□ 0.89
C9orf40Q8IXQ3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.6■□□□□ 0.89
C9orf40Q8IXQ3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
C9orf40Q8IXQ3 DUSP8P3-201ENST00000399571 1760 ntBASIC20.6■□□□□ 0.89
C9orf40Q8IXQ3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
C9orf40Q8IXQ3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
C9orf40Q8IXQ3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
C9orf40Q8IXQ3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.6■□□□□ 0.89
C9orf40Q8IXQ3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.6■□□□□ 0.89
C9orf40Q8IXQ3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
C9orf40Q8IXQ3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
C9orf40Q8IXQ3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
C9orf40Q8IXQ3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
C9orf40Q8IXQ3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
C9orf40Q8IXQ3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
C9orf40Q8IXQ3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
C9orf40Q8IXQ3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
C9orf40Q8IXQ3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
C9orf40Q8IXQ3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
C9orf40Q8IXQ3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.59■□□□□ 0.89
C9orf40Q8IXQ3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
C9orf40Q8IXQ3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.59■□□□□ 0.89
C9orf40Q8IXQ3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
C9orf40Q8IXQ3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.59■□□□□ 0.89
C9orf40Q8IXQ3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
C9orf40Q8IXQ3 AC133561.4-201ENST00000566112 224 ntBASIC20.59■□□□□ 0.89
C9orf40Q8IXQ3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
C9orf40Q8IXQ3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
C9orf40Q8IXQ3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.59■□□□□ 0.89
C9orf40Q8IXQ3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
C9orf40Q8IXQ3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
C9orf40Q8IXQ3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
C9orf40Q8IXQ3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.89
C9orf40Q8IXQ3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
C9orf40Q8IXQ3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
C9orf40Q8IXQ3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
C9orf40Q8IXQ3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.58■□□□□ 0.89
C9orf40Q8IXQ3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.58■□□□□ 0.89
C9orf40Q8IXQ3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.58■□□□□ 0.89
C9orf40Q8IXQ3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
C9orf40Q8IXQ3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
C9orf40Q8IXQ3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C9orf40Q8IXQ3 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.57■□□□□ 0.88
C9orf40Q8IXQ3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C9orf40Q8IXQ3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
C9orf40Q8IXQ3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
C9orf40Q8IXQ3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
C9orf40Q8IXQ3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.57■□□□□ 0.88
C9orf40Q8IXQ3 AL031432.3-201ENST00000607698 485 ntBASIC20.57■□□□□ 0.88
C9orf40Q8IXQ3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
C9orf40Q8IXQ3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.57■□□□□ 0.88
C9orf40Q8IXQ3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.57■□□□□ 0.88
C9orf40Q8IXQ3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.57■□□□□ 0.88
C9orf40Q8IXQ3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C9orf40Q8IXQ3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.57■□□□□ 0.88
C9orf40Q8IXQ3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
C9orf40Q8IXQ3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
C9orf40Q8IXQ3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.56■□□□□ 0.88
C9orf40Q8IXQ3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.56■□□□□ 0.88
C9orf40Q8IXQ3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C9orf40Q8IXQ3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.56■□□□□ 0.88
C9orf40Q8IXQ3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C9orf40Q8IXQ3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C9orf40Q8IXQ3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
C9orf40Q8IXQ3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.56■□□□□ 0.88
C9orf40Q8IXQ3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.56■□□□□ 0.88
C9orf40Q8IXQ3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C9orf40Q8IXQ3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
C9orf40Q8IXQ3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C9orf40Q8IXQ3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C9orf40Q8IXQ3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.55■□□□□ 0.88
C9orf40Q8IXQ3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C9orf40Q8IXQ3 EDA-201ENST00000338901 1233 ntBASIC20.55■□□□□ 0.88
C9orf40Q8IXQ3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
C9orf40Q8IXQ3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.55■□□□□ 0.88
C9orf40Q8IXQ3 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.55■□□□□ 0.88
C9orf40Q8IXQ3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.55■□□□□ 0.88
C9orf40Q8IXQ3 AC004687.1-201ENST00000579003 1625 ntBASIC20.55■□□□□ 0.88
C9orf40Q8IXQ3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C9orf40Q8IXQ3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C9orf40Q8IXQ3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
C9orf40Q8IXQ3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C9orf40Q8IXQ3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
C9orf40Q8IXQ3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.54■□□□□ 0.88
C9orf40Q8IXQ3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
C9orf40Q8IXQ3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.54■□□□□ 0.88
C9orf40Q8IXQ3 AC005837.3-201ENST00000612163 286 ntBASIC20.54■□□□□ 0.88
C9orf40Q8IXQ3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.54■□□□□ 0.88
C9orf40Q8IXQ3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.54■□□□□ 0.88
C9orf40Q8IXQ3 DUSP8P5-201ENST00000422884 1815 ntBASIC20.54■□□□□ 0.88
C9orf40Q8IXQ3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C9orf40Q8IXQ3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
C9orf40Q8IXQ3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
C9orf40Q8IXQ3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C9orf40Q8IXQ3 AL355001.2-201ENST00000620617 1191 ntBASIC20.53■□□□□ 0.88
C9orf40Q8IXQ3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
C9orf40Q8IXQ3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C9orf40Q8IXQ3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms