Protein–RNA interactions for Protein: Q8IWR1

TRIM59, Tripartite motif-containing protein 59, humanhuman

Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59Q8IWR1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
TRIM59Q8IWR1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC24.23■■□□□ 1.47
TRIM59Q8IWR1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.23■■□□□ 1.47
TRIM59Q8IWR1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.23■■□□□ 1.47
TRIM59Q8IWR1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TRIM59Q8IWR1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
TRIM59Q8IWR1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
TRIM59Q8IWR1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TRIM59Q8IWR1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRIM59Q8IWR1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
TRIM59Q8IWR1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TRIM59Q8IWR1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRIM59Q8IWR1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
TRIM59Q8IWR1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
TRIM59Q8IWR1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.22■■□□□ 1.47
TRIM59Q8IWR1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
TRIM59Q8IWR1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
TRIM59Q8IWR1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRIM59Q8IWR1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRIM59Q8IWR1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC24.21■■□□□ 1.47
TRIM59Q8IWR1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TRIM59Q8IWR1 C17orf82-201ENST00000623772 1530 ntBASIC24.21■■□□□ 1.47
TRIM59Q8IWR1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC24.21■■□□□ 1.47
TRIM59Q8IWR1 MIR6724-1-201ENST00000616420 92 ntBASIC24.21■■□□□ 1.47
TRIM59Q8IWR1 MIR6724-2-201ENST00000616483 92 ntBASIC24.21■■□□□ 1.47
TRIM59Q8IWR1 MIR6724-4-201ENST00000617390 92 ntBASIC24.21■■□□□ 1.47
TRIM59Q8IWR1 MIR6724-3-201ENST00000622482 92 ntBASIC24.21■■□□□ 1.47
TRIM59Q8IWR1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TRIM59Q8IWR1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC24.21■■□□□ 1.47
TRIM59Q8IWR1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
TRIM59Q8IWR1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TRIM59Q8IWR1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.21■■□□□ 1.47
TRIM59Q8IWR1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
TRIM59Q8IWR1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC24.2■■□□□ 1.47
TRIM59Q8IWR1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
TRIM59Q8IWR1 EP400NL-214ENST00000641289 2402 ntBASIC24.2■■□□□ 1.46
TRIM59Q8IWR1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.2■■□□□ 1.46
TRIM59Q8IWR1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.2■■□□□ 1.46
TRIM59Q8IWR1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
TRIM59Q8IWR1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRIM59Q8IWR1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
TRIM59Q8IWR1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC24.2■■□□□ 1.46
TRIM59Q8IWR1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRIM59Q8IWR1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRIM59Q8IWR1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC24.19■■□□□ 1.46
TRIM59Q8IWR1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
TRIM59Q8IWR1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TRIM59Q8IWR1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TRIM59Q8IWR1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
TRIM59Q8IWR1 AC127496.7-201ENST00000625110 1798 ntBASIC24.19■■□□□ 1.46
TRIM59Q8IWR1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM59Q8IWR1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM59Q8IWR1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM59Q8IWR1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
TRIM59Q8IWR1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM59Q8IWR1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM59Q8IWR1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.18■■□□□ 1.46
TRIM59Q8IWR1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM59Q8IWR1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
TRIM59Q8IWR1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM59Q8IWR1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM59Q8IWR1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM59Q8IWR1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
TRIM59Q8IWR1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM59Q8IWR1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM59Q8IWR1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM59Q8IWR1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
TRIM59Q8IWR1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM59Q8IWR1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM59Q8IWR1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
TRIM59Q8IWR1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM59Q8IWR1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.17■■□□□ 1.46
TRIM59Q8IWR1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC24.17■■□□□ 1.46
TRIM59Q8IWR1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM59Q8IWR1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.17■■□□□ 1.46
TRIM59Q8IWR1 ECEL1P1-201ENST00000373592 1742 ntBASIC24.17■■□□□ 1.46
TRIM59Q8IWR1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM59Q8IWR1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM59Q8IWR1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC24.17■■□□□ 1.46
TRIM59Q8IWR1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM59Q8IWR1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
TRIM59Q8IWR1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM59Q8IWR1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM59Q8IWR1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM59Q8IWR1 AC087742.1-201ENST00000575880 1738 ntBASIC24.16■■□□□ 1.46
TRIM59Q8IWR1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC24.16■■□□□ 1.46
TRIM59Q8IWR1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM59Q8IWR1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.16■■□□□ 1.46
TRIM59Q8IWR1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.16■■□□□ 1.46
TRIM59Q8IWR1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC24.16■■□□□ 1.46
TRIM59Q8IWR1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
TRIM59Q8IWR1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM59Q8IWR1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM59Q8IWR1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM59Q8IWR1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.15■■□□□ 1.46
TRIM59Q8IWR1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM59Q8IWR1 GUSBP5-201ENST00000418136 578 ntBASIC24.15■■□□□ 1.46
TRIM59Q8IWR1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM59Q8IWR1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC24.15■■□□□ 1.46
TRIM59Q8IWR1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms