Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.68■■□□□ 1.22
SFTPA1Q8IWL2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
SFTPA1Q8IWL2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
SFTPA1Q8IWL2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SFTPA1Q8IWL2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
SFTPA1Q8IWL2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SFTPA1Q8IWL2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SFTPA1Q8IWL2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.68■■□□□ 1.22
SFTPA1Q8IWL2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
SFTPA1Q8IWL2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.68■■□□□ 1.22
SFTPA1Q8IWL2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.68■■□□□ 1.22
SFTPA1Q8IWL2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SFTPA1Q8IWL2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SFTPA1Q8IWL2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.67■■□□□ 1.22
SFTPA1Q8IWL2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.67■■□□□ 1.22
SFTPA1Q8IWL2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
SFTPA1Q8IWL2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
SFTPA1Q8IWL2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
SFTPA1Q8IWL2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
SFTPA1Q8IWL2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
SFTPA1Q8IWL2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SFTPA1Q8IWL2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
SFTPA1Q8IWL2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.67■■□□□ 1.22
SFTPA1Q8IWL2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.67■■□□□ 1.22
SFTPA1Q8IWL2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SFTPA1Q8IWL2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.67■■□□□ 1.22
SFTPA1Q8IWL2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SFTPA1Q8IWL2 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SFTPA1Q8IWL2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SFTPA1Q8IWL2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SFTPA1Q8IWL2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SFTPA1Q8IWL2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SFTPA1Q8IWL2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SFTPA1Q8IWL2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
SFTPA1Q8IWL2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.66■■□□□ 1.22
SFTPA1Q8IWL2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.66■■□□□ 1.22
SFTPA1Q8IWL2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.66■■□□□ 1.22
SFTPA1Q8IWL2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
SFTPA1Q8IWL2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SFTPA1Q8IWL2 CCDC92B-201ENST00000575506 885 ntBASIC22.66■■□□□ 1.22
SFTPA1Q8IWL2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.66■■□□□ 1.22
SFTPA1Q8IWL2 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
SFTPA1Q8IWL2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SFTPA1Q8IWL2 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SFTPA1Q8IWL2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SFTPA1Q8IWL2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SFTPA1Q8IWL2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.65■■□□□ 1.22
SFTPA1Q8IWL2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.65■■□□□ 1.22
SFTPA1Q8IWL2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SFTPA1Q8IWL2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SFTPA1Q8IWL2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.65■■□□□ 1.22
SFTPA1Q8IWL2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SFTPA1Q8IWL2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SFTPA1Q8IWL2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SFTPA1Q8IWL2 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SFTPA1Q8IWL2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.64■■□□□ 1.21
SFTPA1Q8IWL2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.64■■□□□ 1.21
SFTPA1Q8IWL2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
SFTPA1Q8IWL2 AC123595.1-201ENST00000440769 1046 ntBASIC22.64■■□□□ 1.21
SFTPA1Q8IWL2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.64■■□□□ 1.21
SFTPA1Q8IWL2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.64■■□□□ 1.21
SFTPA1Q8IWL2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SFTPA1Q8IWL2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.64■■□□□ 1.21
SFTPA1Q8IWL2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.21
SFTPA1Q8IWL2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SFTPA1Q8IWL2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SFTPA1Q8IWL2 LINC00543-201ENST00000567234 1845 ntBASIC22.64■■□□□ 1.21
SFTPA1Q8IWL2 ABCB10P4-201ENST00000566803 2184 ntBASIC22.63■■□□□ 1.21
SFTPA1Q8IWL2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SFTPA1Q8IWL2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
SFTPA1Q8IWL2 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.63■■□□□ 1.21
SFTPA1Q8IWL2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SFTPA1Q8IWL2 AL139125.2-201ENST00000623134 1869 ntBASIC22.63■■□□□ 1.21
SFTPA1Q8IWL2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.63■■□□□ 1.21
SFTPA1Q8IWL2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.63■■□□□ 1.21
SFTPA1Q8IWL2 AL354811.1-201ENST00000610286 706 ntBASIC22.63■■□□□ 1.21
SFTPA1Q8IWL2 AC079630.1-202ENST00000618127 1840 ntBASIC22.63■■□□□ 1.21
SFTPA1Q8IWL2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SFTPA1Q8IWL2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SFTPA1Q8IWL2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.62■■□□□ 1.21
SFTPA1Q8IWL2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
SFTPA1Q8IWL2 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
SFTPA1Q8IWL2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.62■■□□□ 1.21
SFTPA1Q8IWL2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SFTPA1Q8IWL2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.62■■□□□ 1.21
SFTPA1Q8IWL2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.62■■□□□ 1.21
SFTPA1Q8IWL2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SFTPA1Q8IWL2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SFTPA1Q8IWL2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.61■■□□□ 1.21
SFTPA1Q8IWL2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SFTPA1Q8IWL2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC22.61■■□□□ 1.21
SFTPA1Q8IWL2 AC090192.1-201ENST00000517740 490 ntBASIC22.61■■□□□ 1.21
SFTPA1Q8IWL2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.61■■□□□ 1.21
SFTPA1Q8IWL2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
SFTPA1Q8IWL2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.61■■□□□ 1.21
SFTPA1Q8IWL2 RARRES2P11-201ENST00000635158 484 ntBASIC22.61■■□□□ 1.21
SFTPA1Q8IWL2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SFTPA1Q8IWL2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.61■■□□□ 1.21
SFTPA1Q8IWL2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SFTPA1Q8IWL2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms