Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 MIR4466-201ENST00000606121 54 ntBASIC20.82■□□□□ 0.92
CCDC71Q8IV32 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC71Q8IV32 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CCDC71Q8IV32 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC71Q8IV32 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC71Q8IV32 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC71Q8IV32 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC71Q8IV32 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC71Q8IV32 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC71Q8IV32 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC71Q8IV32 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC71Q8IV32 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC71Q8IV32 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC71Q8IV32 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC71Q8IV32 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC71Q8IV32 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC71Q8IV32 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC71Q8IV32 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC71Q8IV32 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC71Q8IV32 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC71Q8IV32 AC007375.3-201ENST00000600936 2314 ntBASIC20.8■□□□□ 0.92
CCDC71Q8IV32 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC71Q8IV32 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC71Q8IV32 AC096631.2-201ENST00000436136 790 ntBASIC20.8■□□□□ 0.92
CCDC71Q8IV32 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.8■□□□□ 0.92
CCDC71Q8IV32 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC71Q8IV32 AC110285.6-201ENST00000617652 491 ntBASIC20.8■□□□□ 0.92
CCDC71Q8IV32 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CCDC71Q8IV32 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC71Q8IV32 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC71Q8IV32 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC71Q8IV32 AC127496.7-201ENST00000625110 1798 ntBASIC20.8■□□□□ 0.92
CCDC71Q8IV32 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC71Q8IV32 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC71Q8IV32 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC71Q8IV32 AC137767.1-201ENST00000602918 1920 ntBASIC20.79■□□□□ 0.92
CCDC71Q8IV32 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC71Q8IV32 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC71Q8IV32 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC71Q8IV32 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC71Q8IV32 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CCDC71Q8IV32 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC71Q8IV32 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC71Q8IV32 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC71Q8IV32 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC71Q8IV32 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC71Q8IV32 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC71Q8IV32 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC71Q8IV32 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC71Q8IV32 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC71Q8IV32 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC71Q8IV32 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.77■□□□□ 0.92
CCDC71Q8IV32 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC71Q8IV32 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC71Q8IV32 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.77■□□□□ 0.92
CCDC71Q8IV32 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC71Q8IV32 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.77■□□□□ 0.92
CCDC71Q8IV32 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CCDC71Q8IV32 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CCDC71Q8IV32 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
CCDC71Q8IV32 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC71Q8IV32 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC71Q8IV32 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC71Q8IV32 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
CCDC71Q8IV32 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC71Q8IV32 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC71Q8IV32 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC71Q8IV32 AL512631.2-201ENST00000604634 923 ntBASIC20.76■□□□□ 0.91
CCDC71Q8IV32 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.76■□□□□ 0.91
CCDC71Q8IV32 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC71Q8IV32 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC71Q8IV32 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC71Q8IV32 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC71Q8IV32 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CCDC71Q8IV32 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC71Q8IV32 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CCDC71Q8IV32 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC71Q8IV32 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC71Q8IV32 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC71Q8IV32 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC71Q8IV32 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC71Q8IV32 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CCDC71Q8IV32 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC71Q8IV32 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC71Q8IV32 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC71Q8IV32 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CCDC71Q8IV32 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC71Q8IV32 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC71Q8IV32 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.74■□□□□ 0.91
CCDC71Q8IV32 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC71Q8IV32 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CCDC71Q8IV32 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CCDC71Q8IV32 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CCDC71Q8IV32 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC71Q8IV32 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC71Q8IV32 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC71Q8IV32 AC090877.2-201ENST00000558441 1738 ntBASIC20.73■□□□□ 0.91
CCDC71Q8IV32 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CCDC71Q8IV32 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.73■□□□□ 0.91
CCDC71Q8IV32 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms