Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CHMP1BQ7LBR1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.32■□□□□ 0.84
CHMP1BQ7LBR1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP1BQ7LBR1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP1BQ7LBR1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.31■□□□□ 0.84
CHMP1BQ7LBR1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP1BQ7LBR1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.31■□□□□ 0.84
CHMP1BQ7LBR1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP1BQ7LBR1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP1BQ7LBR1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CHMP1BQ7LBR1 AC009102.2-201ENST00000606772 1639 ntBASIC20.31■□□□□ 0.84
CHMP1BQ7LBR1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP1BQ7LBR1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP1BQ7LBR1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP1BQ7LBR1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP1BQ7LBR1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP1BQ7LBR1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP1BQ7LBR1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.3■□□□□ 0.84
CHMP1BQ7LBR1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP1BQ7LBR1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.29■□□□□ 0.84
CHMP1BQ7LBR1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
CHMP1BQ7LBR1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.29■□□□□ 0.84
CHMP1BQ7LBR1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP1BQ7LBR1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP1BQ7LBR1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP1BQ7LBR1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP1BQ7LBR1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP1BQ7LBR1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.29■□□□□ 0.84
CHMP1BQ7LBR1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP1BQ7LBR1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.29■□□□□ 0.84
CHMP1BQ7LBR1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP1BQ7LBR1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP1BQ7LBR1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP1BQ7LBR1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.28■□□□□ 0.84
CHMP1BQ7LBR1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP1BQ7LBR1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP1BQ7LBR1 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP1BQ7LBR1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CHMP1BQ7LBR1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP1BQ7LBR1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.28■□□□□ 0.84
CHMP1BQ7LBR1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP1BQ7LBR1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.28■□□□□ 0.84
CHMP1BQ7LBR1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CHMP1BQ7LBR1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP1BQ7LBR1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP1BQ7LBR1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP1BQ7LBR1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP1BQ7LBR1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.28■□□□□ 0.84
CHMP1BQ7LBR1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CHMP1BQ7LBR1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP1BQ7LBR1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP1BQ7LBR1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP1BQ7LBR1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP1BQ7LBR1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP1BQ7LBR1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP1BQ7LBR1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP1BQ7LBR1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.27■□□□□ 0.84
CHMP1BQ7LBR1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP1BQ7LBR1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP1BQ7LBR1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP1BQ7LBR1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.27■□□□□ 0.84
CHMP1BQ7LBR1 AC241377.3-202ENST00000626088 1088 ntBASIC20.27■□□□□ 0.84
CHMP1BQ7LBR1 AC241585.3-202ENST00000628937 1088 ntBASIC20.27■□□□□ 0.84
CHMP1BQ7LBR1 AC245100.8-202ENST00000629247 1058 ntBASIC20.27■□□□□ 0.84
CHMP1BQ7LBR1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP1BQ7LBR1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP1BQ7LBR1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CHMP1BQ7LBR1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CHMP1BQ7LBR1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CHMP1BQ7LBR1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
CHMP1BQ7LBR1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP1BQ7LBR1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP1BQ7LBR1 SYT6-210ENST00000641643 1587 ntBASIC20.26■□□□□ 0.83
CHMP1BQ7LBR1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP1BQ7LBR1 UNC93B3-201ENST00000308076 687 ntBASIC20.26■□□□□ 0.83
CHMP1BQ7LBR1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP1BQ7LBR1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.26■□□□□ 0.83
CHMP1BQ7LBR1 PBX2P1-201ENST00000493219 1291 ntBASIC20.26■□□□□ 0.83
CHMP1BQ7LBR1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP1BQ7LBR1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP1BQ7LBR1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
CHMP1BQ7LBR1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP1BQ7LBR1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP1BQ7LBR1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP1BQ7LBR1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP1BQ7LBR1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP1BQ7LBR1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP1BQ7LBR1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CHMP1BQ7LBR1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CHMP1BQ7LBR1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.25■□□□□ 0.83
CHMP1BQ7LBR1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CHMP1BQ7LBR1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP1BQ7LBR1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP1BQ7LBR1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP1BQ7LBR1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP1BQ7LBR1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP1BQ7LBR1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP1BQ7LBR1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP1BQ7LBR1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.24■□□□□ 0.83
CHMP1BQ7LBR1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms